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  5. GSVIVT01010945001

GSVIVT01010945001 (AtATG18a)


Aliases : AtATG18a

Description : Vesicle trafficking.autophagosome formation.ATG9-2-18 membrane shuttling complex.ATG18 component


Gene families : OG0000802 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000802_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01010945001

Target Alias Description ECC score Gene Family Method Actions
LOC_Os01g07400.1 ATG18D,... component ATG18 of autophagosome ATG9-2-18 membrane... 0.04 OrthoFinder output from all 47 species
LOC_Os01g70780.1 AtATG18a, LOC_Os01g70780 component ATG18 of autophagosome ATG9-2-18 membrane... 0.03 OrthoFinder output from all 47 species
Lfl_g17320 AtATG18a component *(ATG18) of autophagosome ATG9-2-18 membrane... 0.05 OrthoFinder output from all 47 species
Mp1g05420.1 AtATG18a component ATG18 of autophagosome ATG9-2-18 membrane... 0.03 OrthoFinder output from all 47 species
Msp_g15254 AtATG18a component *(ATG18) of autophagosome ATG9-2-18 membrane... 0.02 OrthoFinder output from all 47 species
Zm00001e028371_P001 AtATG18a, Zm00001e028371 component ATG18 of autophagosome ATG9-2-18 membrane... 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0005681 spliceosomal complex IEP HCCA
BP GO:0006396 RNA processing IEP HCCA
BP GO:0008380 RNA splicing IEP HCCA
CC GO:0140513 nuclear protein-containing complex IEP HCCA
CC GO:1990904 ribonucleoprotein complex IEP HCCA
InterPro domains Description Start Stop
IPR001680 WD40_repeat 147 172
No external refs found!