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  5. GSVIVT01010794001

GSVIVT01010794001 (STH)


Aliases : STH

Description : RNA biosynthesis.transcriptional activation.C2C2 superfamily.BBX/DBB transcription factor


Gene families : OG0000403 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000403_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01010794001

Target Alias Description ECC score Gene Family Method Actions
Ala_g36004 STO not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g21582 No alias BBX class-IV transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g01138 LZF1, STH3, DBB3 BBX class-IV transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g05445 STO not classified & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g06640 No alias BBX class-IV transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g12390 STO BBX class-IV transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g27847 No alias BBX class-IV transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Smo271535 STO RNA biosynthesis.transcriptional activation.C2C2... 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0008270 zinc ion binding IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR000315 Znf_B-box 53 95
IPR000315 Znf_B-box 4 44
No external refs found!