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  5. GSVIVT01010616001

GSVIVT01010616001 (SLK2)


Aliases : SLK2

Description : Probable transcriptional regulator SLK2 OS=Arabidopsis thaliana


Gene families : OG0000747 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000747_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01010616001
Cluster HCCA: Cluster_95

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00069p00119460 SLK2,... Probable transcriptional regulator SLK2 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
AT1G43850 SEU SEUSS transcriptional co-regulator 0.06 OrthoFinder output from all 47 species
AT4G25515 SLK3 SEUSS-like 3 0.03 OrthoFinder output from all 47 species
Adi_g016540 SEU adapter component *(SEU/SLK) of transcriptional... 0.03 OrthoFinder output from all 47 species
Adi_g086246 SEU adapter component *(SEU/SLK) of transcriptional... 0.03 OrthoFinder output from all 47 species
Adi_g106397 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g117115 SEU adapter component *(SEU/SLK) of transcriptional... 0.02 OrthoFinder output from all 47 species
Aev_g15254 SEU adapter component *(SEU/SLK) of transcriptional... 0.02 OrthoFinder output from all 47 species
Aob_g23087 SEU adapter component *(SEU/SLK) of transcriptional... 0.05 OrthoFinder output from all 47 species
Aop_g21250 SEU adapter component *(SEU/SLK) of transcriptional... 0.05 OrthoFinder output from all 47 species
Aspi01Gene51627.t1 SEU, Aspi01Gene51627 adapter component *(SEU/SLK) of transcriptional... 0.03 OrthoFinder output from all 47 species
Cba_g22419 SEU adapter component *(SEU/SLK) of transcriptional... 0.03 OrthoFinder output from all 47 species
Cba_g75940 SEU adapter component *(SEU/SLK) of transcriptional... 0.02 OrthoFinder output from all 47 species
Ceric.03G041400.1 SEU, Ceric.03G041400 adapter component *(SEU/SLK) of transcriptional... 0.08 OrthoFinder output from all 47 species
Dac_g22707 SEU adapter component *(SEU/SLK) of transcriptional... 0.03 OrthoFinder output from all 47 species
Ehy_g23719 SEU adapter component *(SEU/SLK) of transcriptional... 0.05 OrthoFinder output from all 47 species
Ehy_g29191 SEU adapter component *(SEU/SLK) of transcriptional... 0.03 OrthoFinder output from all 47 species
Gb_04218 SEU Transcriptional corepressor SEUSS OS=Arabidopsis... 0.04 OrthoFinder output from all 47 species
Gb_04695 SLK2 Probable transcriptional regulator SLK2 OS=Arabidopsis... 0.04 OrthoFinder output from all 47 species
Gb_27183 SEU Transcriptional corepressor SEUSS OS=Arabidopsis... 0.05 OrthoFinder output from all 47 species
LOC_Os06g03600.1 SLK2, LOC_Os06g03600 Probable transcriptional regulator SLK2 OS=Arabidopsis... 0.04 OrthoFinder output from all 47 species
LOC_Os11g10060.1 SEU, LOC_Os11g10060 Transcriptional corepressor SEUSS OS=Arabidopsis... 0.04 OrthoFinder output from all 47 species
LOC_Os11g10070.1 SEU, LOC_Os11g10070 Transcriptional corepressor SEUSS OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
Len_g41806 SEU adapter component *(SEU/SLK) of transcriptional... 0.04 OrthoFinder output from all 47 species
Len_g54497 SEU adapter component *(SEU/SLK) of transcriptional... 0.02 OrthoFinder output from all 47 species
Lfl_g05019 SEU adapter component *(SEU/SLK) of transcriptional... 0.06 OrthoFinder output from all 47 species
MA_12796g0010 SEU Transcriptional corepressor SEUSS OS=Arabidopsis... 0.04 OrthoFinder output from all 47 species
MA_13825g0010 No alias no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
MA_208023g0010 SLK2 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
MA_33392g0010 SLK2 Probable transcriptional regulator SLK2 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
Mp1g03270.1 SEU Transcriptional corepressor SEUSS OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
Nbi_g03852 SEU adapter component *(SEU/SLK) of transcriptional... 0.05 OrthoFinder output from all 47 species
Ore_g15709 SEU adapter component *(SEU/SLK) of transcriptional... 0.02 OrthoFinder output from all 47 species
Pir_g13626 SEU adapter component *(SEU/SLK) of transcriptional... 0.03 OrthoFinder output from all 47 species
Pp3c25_7960V3.1 SEU, Pp3c25_7960 SEUSS transcriptional co-regulator 0.02 OrthoFinder output from all 47 species
Ppi_g04706 SEU adapter component *(SEU/SLK) of transcriptional... 0.05 OrthoFinder output from all 47 species
Sacu_v1.1_s0009.g004551 SLK2 adapter component *(SEU/SLK) of transcriptional... 0.03 OrthoFinder output from all 47 species
Sam_g29533 No alias adapter component *(SEU/SLK) of transcriptional... 0.02 OrthoFinder output from all 47 species
Solyc03g026190.3.1 SLK2, Solyc03g026190 Probable transcriptional regulator SLK2 OS=Arabidopsis... 0.09 OrthoFinder output from all 47 species
Solyc06g059750.3.1 SEU, Solyc06g059750 Transcriptional corepressor SEUSS OS=Arabidopsis... 0.07 OrthoFinder output from all 47 species
Solyc06g059760.3.1 SEU, Solyc06g059760 Transcriptional corepressor SEUSS OS=Arabidopsis... 0.05 OrthoFinder output from all 47 species
Tin_g20497 SEU adapter component *(SEU/SLK) of transcriptional... 0.04 OrthoFinder output from all 47 species
Zm00001e011073_P001 SEU, Zm00001e011073 Transcriptional corepressor SEUSS OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
Zm00001e021381_P001 SEU, Zm00001e021381 Transcriptional corepressor SEUSS OS=Arabidopsis... 0.04 OrthoFinder output from all 47 species
Zm00001e029868_P001 SLK2, Zm00001e029868 Probable transcriptional regulator SLK2 OS=Arabidopsis... 0.04 OrthoFinder output from all 47 species
Zm00001e039584_P001 SEU, Zm00001e039584 Transcriptional corepressor SEUSS OS=Arabidopsis... 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004842 ubiquitin-protein transferase activity IEP HCCA
BP GO:0006508 proteolysis IEP HCCA
BP GO:0006511 ubiquitin-dependent protein catabolic process IEP HCCA
BP GO:0006606 protein import into nucleus IEP HCCA
BP GO:0006886 intracellular protein transport IEP HCCA
BP GO:0006913 nucleocytoplasmic transport IEP HCCA
BP GO:0009057 macromolecule catabolic process IEP HCCA
BP GO:0016567 protein ubiquitination IEP HCCA
BP GO:0019538 protein metabolic process IEP HCCA
MF GO:0019787 ubiquitin-like protein transferase activity IEP HCCA
MF GO:0019899 enzyme binding IEP HCCA
BP GO:0019941 modification-dependent protein catabolic process IEP HCCA
CC GO:0031011 Ino80 complex IEP HCCA
MF GO:0031625 ubiquitin protein ligase binding IEP HCCA
BP GO:0032446 protein modification by small protein conjugation IEP HCCA
BP GO:0033365 protein localization to organelle IEP HCCA
BP GO:0034504 protein localization to nucleus IEP HCCA
BP GO:0043632 modification-dependent macromolecule catabolic process IEP HCCA
BP GO:0044248 cellular catabolic process IEP HCCA
BP GO:0044265 cellular macromolecule catabolic process IEP HCCA
MF GO:0044389 ubiquitin-like protein ligase binding IEP HCCA
BP GO:0051169 nuclear transport IEP HCCA
BP GO:0051170 import into nucleus IEP HCCA
BP GO:0051603 proteolysis involved in protein catabolic process IEP HCCA
MF GO:0061608 nuclear import signal receptor activity IEP HCCA
CC GO:0070603 SWI/SNF superfamily-type complex IEP HCCA
BP GO:0070647 protein modification by small protein conjugation or removal IEP HCCA
BP GO:0072594 establishment of protein localization to organelle IEP HCCA
CC GO:0097346 INO80-type complex IEP HCCA
MF GO:0140104 molecular carrier activity IEP HCCA
MF GO:0140142 nucleocytoplasmic carrier activity IEP HCCA
CC GO:0140513 nuclear protein-containing complex IEP HCCA
CC GO:1904949 ATPase complex IEP HCCA
InterPro domains Description Start Stop
IPR029005 LIM-bd/SEUSS 203 461
No external refs found!