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  5. GSVIVT01010443001

GSVIVT01010443001


Description : F-box/kelch-repeat protein At1g67480 OS=Arabidopsis thaliana


Gene families : OG0003194 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003194_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01010443001
Cluster HCCA: Cluster_26

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00013p00230800 evm_27.TU.AmTr_v1... F-box/kelch-repeat protein At1g67480 OS=Arabidopsis thaliana 0.04 OrthoFinder output from all 47 species
Ala_g07596 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g08788 No alias substrate adaptor of SCF E3 ubiquitin ligase complex &... 0.03 OrthoFinder output from all 47 species
Als_g48840 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g01644 No alias substrate adaptor of SCF E3 ubiquitin ligase complex &... 0.02 OrthoFinder output from all 47 species
Aop_g08584 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g09511 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Dac_g20203 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g06271 No alias substrate adaptor of SCF E3 ubiquitin ligase complex &... 0.03 OrthoFinder output from all 47 species
Dde_g05320 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g01395 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g04321 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0003.g001825 No alias substrate adaptor *(ARKP1) of SCF E3 ubiquitin ligase... 0.03 OrthoFinder output from all 47 species
Tin_g02051 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0005543 phospholipid binding IEP HCCA
CC GO:0005737 cytoplasm IEP HCCA
MF GO:0008289 lipid binding IEP HCCA
MF GO:0033925 mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase activity IEP HCCA
InterPro domains Description Start Stop
IPR006652 Kelch_1 138 185
IPR006652 Kelch_1 187 232
IPR011498 Kelch_2 235 279
IPR001810 F-box_dom 49 88
No external refs found!