GSVIVT01010280001


Description : RNA biosynthesis.transcriptional activation.bHLH transcription factor


Gene families : OG0000725 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000725_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01010280001

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00167p00019840 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.bHLH... 0.03 OrthoFinder output from all 47 species
AT1G27660 No alias basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.05 OrthoFinder output from all 47 species
AT1G49830 No alias basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.07 OrthoFinder output from all 47 species
AT2G20100 No alias basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.09 OrthoFinder output from all 47 species
Adi_g058096 No alias bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g37882 No alias bHLH-type transcription factor & original description: none 0.05 OrthoFinder output from all 47 species
Ala_g13143 No alias bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Als_g08571 No alias bHLH-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Aob_g05285 No alias bHLH-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g06030 No alias bHLH-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene00926.t1 Aspi01Gene00926 bHLH-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g33477 No alias bHLH-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.32G003100.1 Ceric.32G003100 bHLH-type transcription factor & original description:... 0.03 OrthoFinder output from all 47 species
Dac_g08512 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01009761001 No alias RNA biosynthesis.transcriptional activation.bHLH... 0.08 OrthoFinder output from all 47 species
GSVIVT01017050001 No alias RNA biosynthesis.transcriptional activation.bHLH... 0.04 OrthoFinder output from all 47 species
GSVIVT01018886001 No alias RNA biosynthesis.transcriptional activation.bHLH... 0.06 OrthoFinder output from all 47 species
LOC_Os01g13000.1 LOC_Os01g13000 transcription factor (bHLH) 0.04 OrthoFinder output from all 47 species
LOC_Os05g14010.1 LOC_Os05g14010 transcription factor (bHLH) 0.06 OrthoFinder output from all 47 species
Len_g22949 No alias bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g10359 No alias bHLH-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Mp2g19970.1 No alias transcription factor (bHLH) 0.03 OrthoFinder output from all 47 species
Msp_g31190 No alias bHLH-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g27626 No alias bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g44807 No alias bHLH-type transcription factor & original description: none 0.05 OrthoFinder output from all 47 species
Sacu_v1.1_s0034.g011237 No alias bHLH-type transcription factor & original description:... 0.04 OrthoFinder output from all 47 species
Sam_g05050 No alias bHLH-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g16505 No alias bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g18175 No alias bHLH-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Solyc03g120530.3.1 Solyc03g120530 transcription factor (bHLH) 0.07 OrthoFinder output from all 47 species
Solyc06g066580.4.1 Solyc06g066580 transcription factor (bHLH) 0.03 OrthoFinder output from all 47 species
Solyc07g020960.3.1 Solyc07g020960 transcription factor (bHLH) 0.03 OrthoFinder output from all 47 species
Zm00001e010350_P001 Zm00001e010350 transcription factor (bHLH) 0.07 OrthoFinder output from all 47 species
Zm00001e014179_P003 Zm00001e014179 transcription factor (bHLH) 0.03 OrthoFinder output from all 47 species
Zm00001e016395_P001 Zm00001e016395 transcription factor (bHLH) 0.05 OrthoFinder output from all 47 species
Zm00001e034854_P002 Zm00001e034854 transcription factor (bHLH) 0.04 OrthoFinder output from all 47 species
Zm00001e041137_P002 Zm00001e041137 transcription factor (bHLH) 0.05 OrthoFinder output from all 47 species
Zm00001e041465_P001 Zm00001e041465 transcription factor (bHLH) 0.08 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0004672 protein kinase activity IEP HCCA
BP GO:0006468 protein phosphorylation IEP HCCA
BP GO:0006793 phosphorus metabolic process IEP HCCA
BP GO:0006796 phosphate-containing compound metabolic process IEP HCCA
BP GO:0006807 nitrogen compound metabolic process IEP HCCA
BP GO:0008150 biological_process IEP HCCA
MF GO:0016301 kinase activity IEP HCCA
BP GO:0016310 phosphorylation IEP HCCA
MF GO:0016740 transferase activity IEP HCCA
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP HCCA
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP HCCA
BP GO:0019538 protein metabolic process IEP HCCA
BP GO:0036211 protein modification process IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
BP GO:0043412 macromolecule modification IEP HCCA
BP GO:0044237 cellular metabolic process IEP HCCA
MF GO:0140096 catalytic activity, acting on a protein IEP HCCA
BP GO:1901564 organonitrogen compound metabolic process IEP HCCA

No InterPro domains available for this sequence

No external refs found!