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  5. GSVIVT01010264001

GSVIVT01010264001 (NF-YB5)


Aliases : NF-YB5

Description : RNA biosynthesis.transcriptional activation.NF-Y transcription factor complex.NF-YB component


Gene families : OG0000364 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000364_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01010264001
Cluster HCCA: Cluster_124

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00013p00129310 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.NF-Y... 0.03 OrthoFinder output from all 47 species
AMTR_s00057p00202310 NF-YB5,... RNA biosynthesis.transcriptional activation.NF-Y... 0.05 OrthoFinder output from all 47 species
AT2G13570 NF-YB7 nuclear factor Y, subunit B7 0.03 OrthoFinder output from all 47 species
AT2G47810 NF-YB5 nuclear factor Y, subunit B5 0.05 OrthoFinder output from all 47 species
Aspi01Gene16041.t1 NF-YB6, L1L,... transcription factor *(LEC) involved in seed maturation... 0.05 OrthoFinder output from all 47 species
Cba_g10358 EMB212, NF-YB9,... transcription factor *(LEC) involved in seed maturation... 0.02 OrthoFinder output from all 47 species
Dac_g21439 NF-YB3 component *(NF-YB) of NF-Y transcription factor complex... 0.03 OrthoFinder output from all 47 species
Dcu_g42940 NF-YB3 component *(NF-YB) of NF-Y transcription factor complex... 0.03 OrthoFinder output from all 47 species
Pnu_g04888 NF-YB6, L1L not classified & original description: none 0.02 OrthoFinder output from all 47 species
Solyc05g005390.3.1 NF-YB6, L1L,... component NF-YB of NF-Y transcription factor complex 0.03 OrthoFinder output from all 47 species
Solyc06g009010.1.1 NF-YB5, Solyc06g009010 component NF-YB of NF-Y transcription factor complex 0.06 OrthoFinder output from all 47 species
Solyc09g074760.1.1 NF-YB5, Solyc09g074760 component NF-YB of NF-Y transcription factor complex 0.07 OrthoFinder output from all 47 species
Zm00001e021676_P001 NF-YB3, Zm00001e021676 component NF-YB of NF-Y transcription factor complex 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0004601 peroxidase activity IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005506 iron ion binding IEP HCCA
BP GO:0006950 response to stress IEP HCCA
BP GO:0006979 response to oxidative stress IEP HCCA
MF GO:0016209 antioxidant activity IEP HCCA
MF GO:0016491 oxidoreductase activity IEP HCCA
MF GO:0016684 oxidoreductase activity, acting on peroxide as acceptor IEP HCCA
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP HCCA
MF GO:0020037 heme binding IEP HCCA
MF GO:0030976 thiamine pyrophosphate binding IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043169 cation binding IEP HCCA
MF GO:0045735 nutrient reservoir activity IEP HCCA
MF GO:0046872 metal ion binding IEP HCCA
MF GO:0046906 tetrapyrrole binding IEP HCCA
MF GO:0046914 transition metal ion binding IEP HCCA
BP GO:0050896 response to stimulus IEP HCCA
MF GO:0050997 quaternary ammonium group binding IEP HCCA
BP GO:0055114 obsolete oxidation-reduction process IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
MF GO:1901681 sulfur compound binding IEP HCCA
InterPro domains Description Start Stop
IPR003958 CBFA_NFYB_domain 9 72
No external refs found!