GSVIVT01010251001

Description : Probable helicase MAGATAMA 3 OS=Arabidopsis thaliana

Gene families : OG0001121 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001121_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: GSVIVT01010251001
Cluster	HCCA: Cluster_9

Target	Alias	Description	ECC score	Gene Family Method
AT5G37160	No alias	P-loop containing nucleoside triphosphate hydrolases...	0.02	OrthoFinder output from all 47 species
Cpa\|evm.model.tig00000889.16	MAA3	Probable helicase MAGATAMA 3 OS=Arabidopsis thaliana	0.02	OrthoFinder output from all 47 species
Cpa\|evm.model.tig00020629.60	No alias	No description available	0.01	OrthoFinder output from all 47 species
Cpa\|evm.model.tig00020629.61	No alias	No description available	0.01	OrthoFinder output from all 47 species
Dac_g39815	No alias	not classified & original description: none	0.07	OrthoFinder output from all 47 species
Dcu_g20539	No alias	not classified & original description: none	0.05	OrthoFinder output from all 47 species
GSVIVT01032337001	No alias	No description available	0.05	OrthoFinder output from all 47 species
LOC_Os04g49320.1	LOC_Os04g49320	Probable helicase MAGATAMA 3 OS=Arabidopsis thaliana...	0.03	OrthoFinder output from all 47 species
MA_245976g0010	No alias	Probable helicase MAGATAMA 3 OS=Arabidopsis thaliana...	0.05	OrthoFinder output from all 47 species
Solyc06g010110.1.1	Solyc06g010110	Regulator of nonsense transcripts 1 homolog...	0.05	OrthoFinder output from all 47 species
Spa_g18276	No alias	not classified & original description: none	0.04	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005524	ATP binding	IEA	Interproscan
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
MF	GO:0003968	RNA-dependent RNA polymerase activity	IEP	HCCA
MF	GO:0016772	transferase activity, transferring phosphorus-containing groups	IEP	HCCA
MF	GO:0016779	nucleotidyltransferase activity	IEP	HCCA
MF	GO:0034062	5'-3' RNA polymerase activity	IEP	HCCA
MF	GO:0097747	RNA polymerase activity	IEP	HCCA
MF	GO:0140098	catalytic activity, acting on RNA	IEP	HCCA
MF	GO:0140640	catalytic activity, acting on a nucleic acid	IEP	HCCA

No InterPro domains available for this sequence

External Links

No external refs found!