1. Home
  2. Species
  3. Vitis vinifera
  4. Sequence
  5. GSVIVT01010153001

GSVIVT01010153001


Description : Large ribosomal RNA subunit accumulation protein YCED homolog 2, chloroplastic OS=Arabidopsis thaliana


Gene families : OG0012201 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0012201_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01010153001

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00029p00095840 evm_27.TU.AmTr_v1... Large ribosomal RNA subunit accumulation protein YCED... 0.08 OrthoFinder output from all 47 species
AT3G19800 No alias Protein of unknown function (DUF177) 0.03 OrthoFinder output from all 47 species
Gb_07148 No alias Large ribosomal RNA subunit accumulation protein YCED... 0.05 OrthoFinder output from all 47 species
LOC_Os04g44340.1 LOC_Os04g44340 Large ribosomal RNA subunit accumulation protein YCED... 0.1 OrthoFinder output from all 47 species
Solyc02g055440.4.1 Solyc02g055440 Large ribosomal RNA subunit accumulation protein YCED... 0.12 OrthoFinder output from all 47 species
Zm00001e007542_P001 Zm00001e007542 Large ribosomal RNA subunit accumulation protein YCED... 0.1 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
CC GO:0005886 plasma membrane IEP HCCA
BP GO:0006352 DNA-templated transcription initiation IEP HCCA
BP GO:0006413 translational initiation IEP HCCA
CC GO:0009521 photosystem IEP HCCA
CC GO:0009523 photosystem II IEP HCCA
CC GO:0009654 photosystem II oxygen evolving complex IEP HCCA
BP GO:0015979 photosynthesis IEP HCCA
MF GO:0016651 oxidoreductase activity, acting on NAD(P)H IEP HCCA
MF GO:0016655 oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor IEP HCCA
CC GO:0019898 extrinsic component of membrane IEP HCCA
CC GO:1990204 oxidoreductase complex IEP HCCA

No InterPro domains available for this sequence

No external refs found!