GSVIVT01009810001 (RD19A, RD19)

Aliases : RD19A, RD19

Description : Protein degradation.peptidase families.cysteine-type peptidase activities.papain-type protease

Gene families : OG0001436 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001436_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: GSVIVT01009810001
Cluster	HCCA: Cluster_40

Target	Alias	Description	ECC score	Gene Family Method
AT4G39090	RD19A, RD19	Papain family cysteine protease	0.05	OrthoFinder output from all 47 species
Adi_g047048	No alias	EC_3.4 hydrolase acting on peptide bond (peptidase) &...	0.03	OrthoFinder output from all 47 species
Ceric.05G067800.1	RD19A, RD19,...	EC_3.4 hydrolase acting on peptide bond (peptidase) &...	0.04	OrthoFinder output from all 47 species
Lfl_g21556	No alias	EC_3.4 hydrolase acting on peptide bond (peptidase) &...	0.03	OrthoFinder output from all 47 species
Mp2g16550.1	No alias	protease (Papain)	0.03	OrthoFinder output from all 47 species
Ore_g06042	No alias	EC_3.4 hydrolase acting on peptide bond (peptidase) &...	0.03	OrthoFinder output from all 47 species
Ppi_g63889	RD19A, RD19	EC_3.4 hydrolase acting on peptide bond (peptidase) &...	0.02	OrthoFinder output from all 47 species
Sam_g11102	No alias	EC_3.4 hydrolase acting on peptide bond (peptidase) &...	0.04	OrthoFinder output from all 47 species
Solyc04g080960.4.1	Solyc04g080960	protease (Papain)	0.03	OrthoFinder output from all 47 species
Solyc11g008260.2.1	Solyc11g008260	protease (Papain)	0.02	OrthoFinder output from all 47 species
Spa_g55967	No alias	EC_3.4 hydrolase acting on peptide bond (peptidase) &...	0.02	OrthoFinder output from all 47 species
Tin_g12384	No alias	EC_3.4 hydrolase acTing on peptide bond (peptidase) &...	0.03	OrthoFinder output from all 47 species
Zm00001e014521_P001	RD19A, RD19,...	protease (Papain)	0.04	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
BP	GO:0006508	proteolysis	IEA	Interproscan
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
MF	GO:0008233	peptidase activity	None	Extended
MF	GO:0008234	cysteine-type peptidase activity	IEA	Interproscan
MF	GO:0016787	hydrolase activity	None	Extended
BP	GO:0019538	protein metabolic process	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
MF	GO:0140096	catalytic activity, acting on a protein	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended

Type	GO Term	Name	Evidence	Source
CC	GO:0005741	mitochondrial outer membrane	IEP	HCCA
BP	GO:0006629	lipid metabolic process	IEP	HCCA
BP	GO:0006810	transport	IEP	HCCA
MF	GO:0008374	O-acyltransferase activity	IEP	HCCA
BP	GO:0016567	protein ubiquitination	IEP	HCCA
CC	GO:0019867	outer membrane	IEP	HCCA
CC	GO:0031090	organelle membrane	IEP	HCCA
CC	GO:0031966	mitochondrial membrane	IEP	HCCA
CC	GO:0031968	organelle outer membrane	IEP	HCCA
BP	GO:0032446	protein modification by small protein conjugation	IEP	HCCA
BP	GO:0051179	localization	IEP	HCCA
BP	GO:0051234	establishment of localization	IEP	HCCA
BP	GO:0055085	transmembrane transport	IEP	HCCA
CC	GO:0098588	bounding membrane of organelle	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR000668	Peptidase_C1A_C	139	362
IPR013201	Prot_inhib_I29	56	112

External Links

No external refs found!