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  5. GSVIVT01009769001

GSVIVT01009769001 (TIC20)


Aliases : TIC20

Description : Protein translocation.chloroplast.inner envelope TIC translocation system.TIC-20 complex.Tic20-I/IV component


Gene families : OG0005319 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0005319_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01009769001
Cluster HCCA: Cluster_44

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00009p00238260 evm_27.TU.AmTr_v1... Protein translocation.chloroplast.inner envelope TIC... 0.02 OrthoFinder output from all 47 species
AT1G04940 TIC20 translocon at the inner envelope membrane of chloroplasts 20 0.11 OrthoFinder output from all 47 species
Ala_g00901 TIC20 component *(Tic20-I/IV) of inner envelope TIC-20 complex... 0.02 OrthoFinder output from all 47 species
Als_g04203 TIC20 component *(Tic20-I/IV) of inner envelope TIC-20 complex... 0.05 OrthoFinder output from all 47 species
Aspi01Gene07138.t1 TIC20, Aspi01Gene07138 component *(Tic20-I/IV) of inner envelope TIC-20 complex... 0.02 OrthoFinder output from all 47 species
Azfi_s0211.g058124 TIC20 component *(Tic20-I/IV) of inner envelope TIC-20 complex... 0.04 OrthoFinder output from all 47 species
Ceric.01G050900.1 TIC20, Ceric.01G050900 component *(Tic20-I/IV) of inner envelope TIC-20 complex... 0.06 OrthoFinder output from all 47 species
Cre08.g379650 TIC20 Protein translocation.chloroplast.inner envelope TIC... 0.03 OrthoFinder output from all 47 species
Dcu_g14209 TIC20 component *(Tic20-I/IV) of inner envelope TIC-20 complex... 0.03 OrthoFinder output from all 47 species
LOC_Os07g38110.1 LOC_Os07g38110 component Tic20-I/IV of inner envelope TIC-20 complex 0.1 OrthoFinder output from all 47 species
Mp3g05820.1 TIC20 component Tic20-I/IV of inner envelope TIC-20 complex 0.07 OrthoFinder output from all 47 species
Nbi_g08221 TIC20 component *(Tic20-I/IV) of inner envelope TIC-20 complex... 0.03 OrthoFinder output from all 47 species
Solyc04g076740.3.1 TIC20, Solyc04g076740 component Tic20-I/IV of inner envelope TIC-20 complex 0.03 OrthoFinder output from all 47 species
Solyc05g054720.3.1 TIC20, Solyc05g054720 component Tic20-I/IV of inner envelope TIC-20 complex 0.07 OrthoFinder output from all 47 species
Spa_g06283 TIC20 component *(Tic20-I/IV) of inner envelope TIC-20 complex... 0.03 OrthoFinder output from all 47 species
Spa_g29705 TIC20 component *(Tic20-I/IV) of inner envelope TIC-20 complex... 0.04 OrthoFinder output from all 47 species
Tin_g00352 TIC20 component *(Tic20-I/IV) of inner envelope TIC-20 complex... 0.03 OrthoFinder output from all 47 species
Zm00001e035290_P002 TIC20, Zm00001e035290 component Tic20-I/IV of inner envelope TIC-20 complex 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0006457 protein folding IEP HCCA
MF GO:0016742 hydroxymethyl-, formyl- and related transferase activity IEP HCCA
InterPro domains Description Start Stop
IPR005691 Tic20 92 265
No external refs found!