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  5. GSVIVT01009765001

GSVIVT01009765001


Description : Vesicle trafficking.endomembrane trafficking.vacuolar sorting.AP-4 vacuole cargo adaptor complex.AP4M medium mu subunit


Gene families : OG0007035 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0007035_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01009765001

Target Alias Description ECC score Gene Family Method Actions
Als_g03032 No alias medium subunit mu of AP-4 vacuole cargo adaptor complex... 0.03 OrthoFinder output from all 47 species
Cba_g04573 No alias medium subunit mu of AP-4 vacuole cargo adaptor complex... 0.02 OrthoFinder output from all 47 species
Ceric.30G009100.1 Ceric.30G009100 medium subunit mu of AP-4 vacuole cargo adaptor complex... 0.05 OrthoFinder output from all 47 species
Cre02.g146600 No alias Vesicle trafficking.endomembrane trafficking.vacuolar... 0.06 OrthoFinder output from all 47 species
Dcu_g01480 No alias medium subunit mu of AP-4 vacuole cargo adaptor complex... 0.07 OrthoFinder output from all 47 species
Ehy_g10129 No alias medium subunit mu of AP-4 vacuole cargo adaptor complex... 0.03 OrthoFinder output from all 47 species
LOC_Os07g42810.2 LOC_Os07g42810 medium subunit mu of AP-4 vacuole cargo adaptor complex 0.07 OrthoFinder output from all 47 species
Lfl_g10476 No alias medium subunit mu of AP-4 vacuole cargo adaptor complex... 0.04 OrthoFinder output from all 47 species
Msp_g35271 No alias medium subunit mu of AP-4 vacuole cargo adaptor complex... 0.03 OrthoFinder output from all 47 species
Nbi_g03680 No alias medium subunit mu of AP-4 vacuole cargo adaptor complex... 0.04 OrthoFinder output from all 47 species
Smo141330 No alias Vesicle trafficking.endomembrane trafficking.vacuolar... 0.05 OrthoFinder output from all 47 species
Solyc04g076230.3.1 Solyc04g076230 medium subunit mu of AP-4 vacuole cargo adaptor complex 0.07 OrthoFinder output from all 47 species
Tin_g02613 No alias medium subunit mu of AP-4 vacuole cargo adaptor complex... 0.04 OrthoFinder output from all 47 species
Zm00001e007492_P001 Zm00001e007492 medium subunit mu of AP-4 vacuole cargo adaptor complex 0.08 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0000221 vacuolar proton-transporting V-type ATPase, V1 domain IEP HCCA
MF GO:0005525 GTP binding IEP HCCA
MF GO:0008324 monoatomic cation transmembrane transporter activity IEP HCCA
MF GO:0009678 pyrophosphate hydrolysis-driven proton transmembrane transporter activity IEP HCCA
MF GO:0015078 proton transmembrane transporter activity IEP HCCA
MF GO:0015318 inorganic molecular entity transmembrane transporter activity IEP HCCA
MF GO:0015399 primary active transmembrane transporter activity IEP HCCA
MF GO:0019001 guanyl nucleotide binding IEP HCCA
MF GO:0019829 ATPase-coupled monoatomic cation transmembrane transporter activity IEP HCCA
MF GO:0022804 active transmembrane transporter activity IEP HCCA
MF GO:0022853 active monoatomic ion transmembrane transporter activity IEP HCCA
MF GO:0022890 inorganic cation transmembrane transporter activity IEP HCCA
MF GO:0032561 guanyl ribonucleotide binding IEP HCCA
CC GO:0033178 proton-transporting two-sector ATPase complex, catalytic domain IEP HCCA
CC GO:0033180 proton-transporting V-type ATPase, V1 domain IEP HCCA
MF GO:0042625 ATPase-coupled ion transmembrane transporter activity IEP HCCA
MF GO:0042626 ATPase-coupled transmembrane transporter activity IEP HCCA
MF GO:0044769 ATPase activity, coupled to transmembrane movement of ions, rotational mechanism IEP HCCA
MF GO:0046961 proton-transporting ATPase activity, rotational mechanism IEP HCCA
CC GO:0098796 membrane protein complex IEP HCCA
MF GO:0140657 ATP-dependent activity IEP HCCA
InterPro domains Description Start Stop
IPR028565 MHD 182 450
IPR022775 AP_mu_sigma_su 1 132
No external refs found!