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  5. GSVIVT01009728001

GSVIVT01009728001 (TLP6, AtTLP6)


Aliases : TLP6, AtTLP6

Description : RNA biosynthesis.transcriptional activation.TUB transcription factor


Gene families : OG0000251 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000251_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01009728001

Target Alias Description ECC score Gene Family Method Actions
Adi_g008982 AtTLP1, TLP1 TUB-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g056850 AtTLP3, TLP3 TUB-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g104657 AtTLP3, TLP3 TUB-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g28713 AtTLP3, TLP3 TUB-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene25766.t1 AtTLP3, TLP3,... TUB-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene69333.t1 AtTLP3, TLP3,... TUB-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g15238 AtTLP3, TLP3 TUB-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g06248 AtTLP3, TLP3 TUB-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g26330 AtTLP3, TLP3 TUB-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
LOC_Os01g64700.2 TLP10, AtTLP10,... transcription factor (TUB) 0.04 OrthoFinder output from all 47 species
MA_10430830g0020 TLP10, AtTLP10 transcription factor (TUB) 0.03 OrthoFinder output from all 47 species
Ppi_g18593 AtTLP3, TLP3 TUB-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g14642 No alias TUB-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g26652 No alias TUB-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g01379 TLP6, AtTLP6 TUB-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g55100 AtTLP3, TLP3 TUB-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Zm00001e001672_P001 AtTLP3, TLP3,... transcription factor (TUB) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR000007 Tubby_C 119 362
IPR001810 F-box_dom 56 108
No external refs found!