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  5. GSVIVT01009612001

GSVIVT01009612001


Description : Protein JINGUBANG OS=Arabidopsis thaliana


Gene families : OG0000309 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000309_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01009612001
Cluster HCCA: Cluster_99

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00109p00135240 evm_27.TU.AmTr_v1... Protein JINGUBANG OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
AMTR_s00156p00066850 evm_27.TU.AmTr_v1... Protein JINGUBANG OS=Arabidopsis thaliana 0.05 OrthoFinder output from all 47 species
Aev_g22068 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g39579 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene36632.t1 Aspi01Gene36632 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene38685.t1 Aspi01Gene38685 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene45302.t1 Aspi01Gene45302 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Azfi_s3305.g115285 No alias not classified & original description: CDS=1-1707 0.02 OrthoFinder output from all 47 species
Ceric.05G066900.1 Ceric.05G066900 not classified & original description: pacid=50578771... 0.03 OrthoFinder output from all 47 species
Ceric.12G075900.1 Ceric.12G075900 not classified & original description: pacid=50601390... 0.03 OrthoFinder output from all 47 species
Ceric.28G012400.1 Ceric.28G012400 not classified & original description: pacid=50570345... 0.03 OrthoFinder output from all 47 species
Dcu_g17369 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g19296 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g25993 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Gb_33498 No alias Protein JINGUBANG OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
LOC_Os03g52870.1 LOC_Os03g52870 Protein JINGUBANG OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Len_g36542 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Msp_g38015 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g10069 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g19836 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g16677 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g12437 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Solyc03g111780.1.1 Solyc03g111780 Protein JINGUBANG OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Solyc04g005020.3.1 Solyc04g005020 Protein JINGUBANG OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Spa_g35902 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g17869 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e005608_P001 Zm00001e005608 Protein JINGUBANG OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004478 methionine adenosyltransferase activity IEP HCCA
MF GO:0004857 enzyme inhibitor activity IEP HCCA
BP GO:0006556 S-adenosylmethionine biosynthetic process IEP HCCA
BP GO:0006790 sulfur compound metabolic process IEP HCCA
BP GO:0006855 xenobiotic transmembrane transport IEP HCCA
MF GO:0008146 sulfotransferase activity IEP HCCA
MF GO:0015291 secondary active transmembrane transporter activity IEP HCCA
MF GO:0015297 antiporter activity IEP HCCA
MF GO:0016765 transferase activity, transferring alkyl or aryl (other than methyl) groups IEP HCCA
MF GO:0016782 transferase activity, transferring sulphur-containing groups IEP HCCA
MF GO:0016810 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds IEP HCCA
MF GO:0019239 deaminase activity IEP HCCA
MF GO:0030234 enzyme regulator activity IEP HCCA
BP GO:0042908 xenobiotic transport IEP HCCA
BP GO:0044272 sulfur compound biosynthetic process IEP HCCA
BP GO:0046500 S-adenosylmethionine metabolic process IEP HCCA
MF GO:0098772 molecular function regulator activity IEP HCCA
MF GO:0140678 molecular function inhibitor activity IEP HCCA
InterPro domains Description Start Stop
IPR001680 WD40_repeat 323 368
IPR001680 WD40_repeat 95 121
IPR001680 WD40_repeat 284 315
IPR001680 WD40_repeat 185 213
IPR001680 WD40_repeat 219 254
No external refs found!