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  5. GSVIVT01009589001

GSVIVT01009589001 (KAN4, ATS)


Aliases : KAN4, ATS

Description : RNA biosynthesis.transcriptional activation.MYB superfamily.G2-like GARP transcription factor


Gene families : OG0000036 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01009589001
Cluster HCCA: Cluster_26

Target Alias Description ECC score Gene Family Method Actions
AT2G02060 No alias Homeodomain-like superfamily protein 0.05 OrthoFinder output from all 47 species
AT5G06800 No alias myb-like HTH transcriptional regulator family protein 0.03 OrthoFinder output from all 47 species
AT5G18240 ATMYR1, MYR1 myb-related protein 1 0.03 OrthoFinder output from all 47 species
Adi_g077902 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aev_g08065 No alias GARP subgroup PHL transcription factor & original... 0.02 OrthoFinder output from all 47 species
Aev_g38880 No alias GARP subgroup PHL transcription factor & original... 0.03 OrthoFinder output from all 47 species
Aspi01Gene42938.t1 Aspi01Gene42938 GARP subgroup PHL transcription factor & original... 0.03 OrthoFinder output from all 47 species
Aspi01Gene55088.t1 Aspi01Gene55088 GARP subgroup PHL transcription factor & original... 0.02 OrthoFinder output from all 47 species
Aspi01Gene65261.t1 Aspi01Gene65261 GARP subgroup PHL transcription factor & original... 0.02 OrthoFinder output from all 47 species
Azfi_s0078.g038249 No alias GARP subgroup PHL transcription factor & original... 0.04 OrthoFinder output from all 47 species
Cba_g14300 KAN, KAN1 KANADI-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g21846 No alias transcription factor *(CLAUSA) & original description: none 0.02 OrthoFinder output from all 47 species
Dac_g44014 No alias transcription factor *(CLAUSA) & original description: none 0.03 OrthoFinder output from all 47 species
LOC_Os02g07170.1 LOC_Os02g07170 G2-like GARP transcription factor 0.03 OrthoFinder output from all 47 species
LOC_Os02g07770.1 APL, WDY, LOC_Os02g07770 G2-like GARP transcription factor 0.06 OrthoFinder output from all 47 species
LOC_Os02g46940.1 KAN2, LOC_Os02g46940 G2-like GARP transcription factor 0.04 OrthoFinder output from all 47 species
LOC_Os03g55760.1 KAN4, ATS, LOC_Os03g55760 G2-like GARP transcription factor 0.03 OrthoFinder output from all 47 species
LOC_Os08g33750.1 LOC_Os08g33750 G2-like GARP transcription factor 0.05 OrthoFinder output from all 47 species
Len_g02256 PHR1, AtPHR1 GARP subgroup PHL transcription factor & original... 0.03 OrthoFinder output from all 47 species
Msp_g24340 PHL1 GARP subgroup PHL transcription factor & original... 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0021.g008353 No alias not classified & original description: CDS=1-393 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0042.g012676 No alias GARP subgroup HHO transcription factor & original... 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0065.g016001 No alias not classified & original description: CDS=379-1050 0.02 OrthoFinder output from all 47 species
Solyc04g050070.3.1 PHL1, Solyc04g050070 G2-like GARP transcription factor 0.03 OrthoFinder output from all 47 species
Solyc08g076400.3.1 KAN2, Solyc08g076400 G2-like GARP transcription factor 0.04 OrthoFinder output from all 47 species
Zm00001e003093_P001 KAN4, ATS, Zm00001e003093 G2-like GARP transcription factor 0.05 OrthoFinder output from all 47 species
Zm00001e004125_P001 Zm00001e004125 G2-like GARP transcription factor 0.06 OrthoFinder output from all 47 species
Zm00001e005797_P001 KAN4, ATS, Zm00001e005797 G2-like GARP transcription factor 0.09 OrthoFinder output from all 47 species
Zm00001e013626_P001 Zm00001e013626 G2-like GARP transcription factor 0.02 OrthoFinder output from all 47 species
Zm00001e014339_P001 Zm00001e014339 Putative Myb family transcription factor At1g14600... 0.05 OrthoFinder output from all 47 species
Zm00001e022454_P001 Zm00001e022454 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Zm00001e030364_P002 Zm00001e030364 G2-like GARP transcription factor 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0005509 calcium ion binding IEP HCCA
MF GO:0046983 protein dimerization activity IEP HCCA
InterPro domains Description Start Stop
IPR001005 SANT/Myb 88 139
No external refs found!