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  5. GSVIVT01009442001

GSVIVT01009442001


Description : Uncharacterized protein At4g06744 OS=Arabidopsis thaliana


Gene families : OG0000448 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000448_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01009442001

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00025p00231840 evm_27.TU.AmTr_v1... Leucine-rich repeat extensin-like protein 2... 0.04 OrthoFinder output from all 47 species
AMTR_s00056p00176290 evm_27.TU.AmTr_v1... Leucine-rich repeat extensin-like protein 3... 0.05 OrthoFinder output from all 47 species
AMTR_s00160p00027170 evm_27.TU.AmTr_v1... Cell wall.cell wall proteins.hydroxyproline-rich... 0.04 OrthoFinder output from all 47 species
AT4G18670 No alias Leucine-rich repeat (LRR) family protein 0.03 OrthoFinder output from all 47 species
AT4G29240 No alias Leucine-rich repeat (LRR) family protein 0.05 OrthoFinder output from all 47 species
Adi_g080109 No alias LRR-domain extensin & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g26231 LRX2 LRR-domain extensin & original description: none 0.03 OrthoFinder output from all 47 species
Als_g03749 No alias LRR-domain extensin & original description: none 0.03 OrthoFinder output from all 47 species
Als_g03771 LRX2 LRR-domain extensin & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g11490 No alias LRR-domain extensin & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene09207.t1 Aspi01Gene09207 LRR-domain extensin & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0013.g013083 LRX2 not classified & original description: CDS=228-2453 0.06 OrthoFinder output from all 47 species
Cba_g03151 No alias LRR-domain extensin & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g14310 LRX2 LRR-domain extensin & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.17G055900.1 Ceric.17G055900 LRR-domain extensin & original description:... 0.03 OrthoFinder output from all 47 species
Dcu_g07517 No alias LRR-domain extensin & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g13236 LRX2 LRR-domain extensin & original description: none 0.04 OrthoFinder output from all 47 species
LOC_Os01g41120.1 LOC_Os01g41120 LRR-domain extensin 0.03 OrthoFinder output from all 47 species
LOC_Os02g04540.1 LRX1, LOC_Os02g04540 LRR-domain extensin 0.03 OrthoFinder output from all 47 species
LOC_Os02g40260.1 LOC_Os02g40260 Uncharacterized protein At4g06744 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
LOC_Os03g43650.1 LOC_Os03g43650 LRR-domain extensin 0.03 OrthoFinder output from all 47 species
LOC_Os04g42620.1 LOC_Os04g42620 Uncharacterized protein At4g06744 OS=Arabidopsis... 0.04 OrthoFinder output from all 47 species
LOC_Os05g08770.2 LOC_Os05g08770 LRR-domain extensin 0.04 OrthoFinder output from all 47 species
LOC_Os05g09640.1 LOC_Os05g09640 Leucine-rich repeat extensin-like protein 4... 0.04 OrthoFinder output from all 47 species
LOC_Os06g49100.1 LRX2, LOC_Os06g49100 LRR-domain extensin 0.05 OrthoFinder output from all 47 species
Nbi_g23899 LRX2 LRR-domain extensin & original description: none 0.05 OrthoFinder output from all 47 species
Pir_g47474 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g05847 LRX2 LRR-domain extensin & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g10314 No alias LRR-domain extensin & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g31622 No alias LRR-domain extensin & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0036.g011513 No alias LRR-domain extensin & original description: CDS=1-1296 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0039.g012064 No alias LRR-domain extensin & original description: CDS=1-1452 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0044.g012995 LRX2 not classified & original description: CDS=401-2401 0.03 OrthoFinder output from all 47 species
Smo412903 No alias Cell wall.cell wall proteins.hydroxyproline-rich... 0.03 OrthoFinder output from all 47 species
Solyc01g107790.2.1 Solyc01g107790 Uncharacterized protein At4g06744 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
Spa_g33020 No alias LRR-domain extensin & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g49283 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g53147 LRX2 LRR-domain extensin & original description: none 0.04 OrthoFinder output from all 47 species
Zm00001e026840_P001 Zm00001e026840 LRR-domain extensin 0.02 OrthoFinder output from all 47 species
Zm00001e041184_P001 Zm00001e041184 Uncharacterized protein At4g06744 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0000786 nucleosome IEP HCCA
BP GO:0006952 defense response IEP HCCA
BP GO:0007275 multicellular organism development IEP HCCA
BP GO:0032501 multicellular organismal process IEP HCCA
BP GO:0032502 developmental process IEP HCCA
CC GO:0032993 protein-DNA complex IEP HCCA
CC GO:0044815 DNA packaging complex IEP HCCA
BP GO:0048856 anatomical structure development IEP HCCA

No InterPro domains available for this sequence

No external refs found!