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  5. GSVIVT01009360001

GSVIVT01009360001 (LBD38)


Aliases : LBD38

Description : RNA biosynthesis.transcriptional activation.AS2/LOB transcription factor


Gene families : OG0001073 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001073_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01009360001
Cluster HCCA: Cluster_38

Target Alias Description ECC score Gene Family Method Actions
AT1G67100 LBD40 LOB domain-containing protein 40 0.05 OrthoFinder output from all 47 species
AT1G68510 LBD42 LOB domain-containing protein 42 0.07 OrthoFinder output from all 47 species
Aop_g02104 LBD38 AS2/LOB-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
LOC_Os03g41330.1 LBD37, ASL39,... transcription factor (AS2/LOB) 0.02 OrthoFinder output from all 47 species
MA_19934g0010 LBD40 transcription factor (AS2/LOB) 0.04 OrthoFinder output from all 47 species
Pp3c16_1150V3.1 LBD37, ASL39, Pp3c16_1150 LOB domain-containing protein 37 0.01 OrthoFinder output from all 47 species
Ppi_g32695 LBD38 AS2/LOB-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0092.g018895 LBD38 AS2/LOB-type transcription factor & original... 0.03 OrthoFinder output from all 47 species
Solyc01g107190.3.1 LBD37, ASL39,... transcription factor (AS2/LOB) 0.02 OrthoFinder output from all 47 species
Spa_g14153 LBD38 AS2/LOB-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0016043 cellular component organization IEP HCCA
MF GO:0030599 pectinesterase activity IEP HCCA
BP GO:0042545 cell wall modification IEP HCCA
BP GO:0045229 external encapsulating structure organization IEP HCCA
MF GO:0045735 nutrient reservoir activity IEP HCCA
MF GO:0052689 carboxylic ester hydrolase activity IEP HCCA
BP GO:0071554 cell wall organization or biogenesis IEP HCCA
BP GO:0071555 cell wall organization IEP HCCA
BP GO:0071840 cellular component organization or biogenesis IEP HCCA
InterPro domains Description Start Stop
IPR004883 LOB 2 101
No external refs found!