1. Home
  2. Species
  3. Vitis vinifera
  4. Sequence
  5. GSVIVT01009285001

GSVIVT01009285001


Description : Cell wall.pectin.homogalacturonan.synthesis.CGR-type methyltransferase


Gene families : OG0003308 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003308_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01009285001
Cluster HCCA: Cluster_11

Target Alias Description ECC score Gene Family Method Actions
AT5G65810 No alias unknown protein; BEST Arabidopsis thaliana protein match... 0.03 OrthoFinder output from all 47 species
Aev_g13188 No alias methyltransferase *(CGR) & original description: none 0.05 OrthoFinder output from all 47 species
Ala_g13025 No alias methyltransferase *(CGR) & original description: none 0.04 OrthoFinder output from all 47 species
Aob_g01313 No alias methyltransferase *(CGR) & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g23120 No alias methyltransferase *(CGR) & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g11903 No alias methyltransferase *(CGR) & original description: none 0.04 OrthoFinder output from all 47 species
Ehy_g02321 No alias methyltransferase *(CGR) & original description: none 0.05 OrthoFinder output from all 47 species
Ehy_g12646 No alias methyltransferase *(CGR) & original description: none 0.05 OrthoFinder output from all 47 species
Gb_13505 No alias methyltransferase (CGR) 0.03 OrthoFinder output from all 47 species
LOC_Os01g05070.1 LOC_Os01g05070 methyltransferase (CGR) 0.03 OrthoFinder output from all 47 species
Len_g46579 No alias methyltransferase *(CGR) & original description: none 0.05 OrthoFinder output from all 47 species
Lfl_g38069 No alias methyltransferase *(CGR) & original description: none 0.02 OrthoFinder output from all 47 species
MA_24468g0010 No alias methyltransferase (CGR) 0.03 OrthoFinder output from all 47 species
Nbi_g43608 No alias methyltransferase *(CGR) & original description: none 0.05 OrthoFinder output from all 47 species
Pir_g02740 No alias methyltransferase *(CGR) & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g05028 No alias methyltransferase *(CGR) & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g30091 No alias methyltransferase *(CGR) & original description: none 0.03 OrthoFinder output from all 47 species
Smo402173 No alias Cell wall.pectin.homogalacturonan.synthesis.CGR-type... 0.03 OrthoFinder output from all 47 species
Solyc02g092000.3.1 Solyc02g092000 methyltransferase (CGR) 0.05 OrthoFinder output from all 47 species
Solyc04g077420.4.1 Solyc04g077420 methyltransferase (CGR) 0.03 OrthoFinder output from all 47 species
Spa_g29968 No alias methyltransferase *(CGR) & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g37902 No alias methyltransferase *(CGR) & original description: none 0.06 OrthoFinder output from all 47 species
Tin_g03175 No alias methyltransferase *(CGR) & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e025797_P004 Zm00001e025797 methyltransferase (CGR) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0030246 carbohydrate binding IEP HCCA
BP GO:1901135 carbohydrate derivative metabolic process IEP HCCA

No InterPro domains available for this sequence

No external refs found!