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  5. GSVIVT01009215001

GSVIVT01009215001


No description available


Gene families : OG0001248 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001248_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01009215001

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00046p00193590 evm_27.TU.AmTr_v1... No description available 0.05 OrthoFinder output from all 47 species
Aev_g08825 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g33317 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g18808 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01006302001 No alias No description available 0.02 OrthoFinder output from all 47 species
GSVIVT01012710001 No alias No description available 0.02 OrthoFinder output from all 47 species
Gb_00786 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Gb_00787 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Len_g19716 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Msp_g20109 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g04774 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Zm00001e013992_P006 Zm00001e013992 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Zm00001e021493_P001 Zm00001e021493 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0006508 proteolysis IEP HCCA
MF GO:0008233 peptidase activity IEP HCCA
MF GO:0008234 cysteine-type peptidase activity IEP HCCA
MF GO:0016787 hydrolase activity IEP HCCA
BP GO:0019538 protein metabolic process IEP HCCA
MF GO:0140096 catalytic activity, acting on a protein IEP HCCA
BP GO:1901564 organonitrogen compound metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR010325 Rhamnogal_lyase 9 212
IPR029411 RG-lyase_III 453 641
IPR029413 RG-lyase_II 367 437
No external refs found!