GSVIVT01009197001 (ZIM, GATA25, TIFY1)

Aliases : ZIM, GATA25, TIFY1

Description : RNA biosynthesis.transcriptional activation.C2C2 superfamily.GATA transcription factor

Gene families : OG0001741 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001741_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: GSVIVT01009197001
Cluster	HCCA: Cluster_115

Target	Alias	Description	ECC score	Gene Family Method
Adi_g008868	TIFY2B, ZML1, GATA24	transcription factor *(C-GATA) & original description: none	0.02	OrthoFinder output from all 47 species
Aob_g04331	TIFY2B, ZML1, GATA24	transcription factor *(C-GATA) & original description: none	0.04	OrthoFinder output from all 47 species
Aspi01Gene31766.t1	TIFY2B, ZML1,...	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Ppi_g12603	ZML2, GATA28, TIFY2A	transcription factor *(C-GATA) & original description: none	0.02	OrthoFinder output from all 47 species
Spa_g38787	TIFY2B, ZML1, GATA24	transcription factor *(C-GATA) & original description: none	0.03	OrthoFinder output from all 47 species
Zm00001e013157_P003	TIFY2B, ZML1,...	transcription factor (GATA)	0.03	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	None	Extended
MF	GO:0005488	binding	None	Extended
BP	GO:0006355	regulation of DNA-templated transcription	IEA	Interproscan
BP	GO:0008150	biological_process	None	Extended
MF	GO:0008270	zinc ion binding	IEA	Interproscan
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043169	cation binding	None	Extended
MF	GO:0043565	sequence-specific DNA binding	IEA	Interproscan
MF	GO:0046872	metal ion binding	None	Extended
MF	GO:0046914	transition metal ion binding	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR010399	Tify_dom	26	58
IPR010402	CCT_domain	91	133
IPR000679	Znf_GATA	159	195

External Links

No external refs found!

GSVIVT01009197001 (ZIM, GATA25, TIFY1)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation