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  5. GSVIVT01009194001

GSVIVT01009194001


Description : BEACH domain-containing protein B OS=Arabidopsis thaliana


Gene families : OG0004729 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004729_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01009194001
Cluster HCCA: Cluster_75

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00033p00224700 evm_27.TU.AmTr_v1... BEACH domain-containing protein B OS=Arabidopsis thaliana 0.07 OrthoFinder output from all 47 species
AT1G58230 No alias binding 0.03 OrthoFinder output from all 47 species
Adi_g012034 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g14930 No alias not classified & original description: none 0.08 OrthoFinder output from all 47 species
Ala_g32022 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Aob_g22480 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene54451.t1 Aspi01Gene54451 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.20G069100.1 Ceric.20G069100 not classified & original description: pacid=50566325... 0.14 OrthoFinder output from all 47 species
Dac_g07809 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g06533 No alias not classified & original description: none 0.08 OrthoFinder output from all 47 species
Dde_g21857 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Gb_28819 No alias BEACH domain-containing protein B OS=Arabidopsis... 0.05 OrthoFinder output from all 47 species
LOC_Os02g06720.1 LOC_Os02g06720 BEACH domain-containing protein B OS=Arabidopsis... 0.07 OrthoFinder output from all 47 species
Len_g14795 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Lfl_g11558 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
MA_10434688g0010 No alias BEACH domain-containing protein B OS=Arabidopsis... 0.13 OrthoFinder output from all 47 species
Mp1g22060.1 No alias BEACH domain-containing protein B OS=Arabidopsis... 0.07 OrthoFinder output from all 47 species
Nbi_g07321 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Pnu_g07056 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g16274 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0179.g024739 No alias not classified & original description: CDS=348-9674 0.04 OrthoFinder output from all 47 species
Sam_g27882 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g50522 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Smo107849 No alias BEACH domain-containing protein B OS=Arabidopsis thaliana 0.06 OrthoFinder output from all 47 species
Solyc04g076500.4.1 Solyc04g076500 BEACH domain-containing protein B OS=Arabidopsis... 0.12 OrthoFinder output from all 47 species
Solyc04g076510.3.1 Solyc04g076510 BEACH domain-containing protein B OS=Arabidopsis... 0.07 OrthoFinder output from all 47 species
Zm00001e025170_P001 Zm00001e025170 BEACH domain-containing protein B OS=Arabidopsis... 0.15 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0016197 endosomal transport IEP HCCA
BP GO:0016482 cytosolic transport IEP HCCA
CC GO:0030906 retromer, cargo-selective complex IEP HCCA
BP GO:0042147 retrograde transport, endosome to Golgi IEP HCCA
InterPro domains Description Start Stop
IPR023362 PH-BEACH_dom 2522 2581
IPR000409 BEACH_dom 2622 2898
IPR031570 NBEA/BDCP_DUF4704 1348 1627
No external refs found!