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  5. GSVIVT01008970001

GSVIVT01008970001


No description available


Gene families : OG0000964 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000964_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01008970001
Cluster HCCA: Cluster_107

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00010p00223040 evm_27.TU.AmTr_v1... COP1-interactive protein 1 OS=Arabidopsis thaliana 0.08 OrthoFinder output from all 47 species
AT1G22060 No alias LOCATED IN: vacuole; EXPRESSED IN: 23 plant structures;... 0.08 OrthoFinder output from all 47 species
AT5G41140 No alias Myosin heavy chain-related protein 0.07 OrthoFinder output from all 47 species
AT5G52280 No alias Myosin heavy chain-related protein 0.06 OrthoFinder output from all 47 species
Aev_g03416 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g19712 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Als_g33131 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g27313 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g33047 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g08140 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Azfi_s0010.g012083 No alias not classified & original description: CDS=678-3254 0.03 OrthoFinder output from all 47 species
Azfi_s0028.g023862 No alias not classified & original description: CDS=554-2527 0.01 OrthoFinder output from all 47 species
Dcu_g15928 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g07957 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g08669 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g18793 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Gb_27516 No alias COP1-interactive protein 1 OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
LOC_Os03g01710.1 LOC_Os03g01710 no hits & (original description: none) 0.08 OrthoFinder output from all 47 species
LOC_Os10g21940.1 LOC_Os10g21940 no hits & (original description: none) 0.1 OrthoFinder output from all 47 species
LOC_Os10g36060.1 LOC_Os10g36060 no hits & (original description: none) 0.09 OrthoFinder output from all 47 species
Len_g08370 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g03505 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
MA_9751268g0010 No alias no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Mp4g12160.1 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Ore_g37092 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g20515 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Smo425588 No alias COP1-interactive protein 1 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
Solyc04g072630.4.1 Solyc04g072630 no hits & (original description: none) 0.12 OrthoFinder output from all 47 species
Solyc08g080780.4.1 Solyc08g080780 no hits & (original description: none) 0.06 OrthoFinder output from all 47 species
Zm00001e004411_P002 Zm00001e004411 no hits & (original description: none) 0.08 OrthoFinder output from all 47 species
Zm00001e012583_P001 Zm00001e012583 no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
Zm00001e018560_P002 Zm00001e018560 no hits & (original description: none) 0.07 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0000148 1,3-beta-D-glucan synthase complex IEP HCCA
BP GO:0000271 polysaccharide biosynthetic process IEP HCCA
MF GO:0003843 1,3-beta-D-glucan synthase activity IEP HCCA
MF GO:0003899 DNA-directed 5'-3' RNA polymerase activity IEP HCCA
CC GO:0005856 cytoskeleton IEP HCCA
BP GO:0005976 polysaccharide metabolic process IEP HCCA
BP GO:0006073 cellular glucan metabolic process IEP HCCA
BP GO:0006074 (1->3)-beta-D-glucan metabolic process IEP HCCA
BP GO:0006075 (1->3)-beta-D-glucan biosynthetic process IEP HCCA
MF GO:0008194 UDP-glycosyltransferase activity IEP HCCA
MF GO:0008378 galactosyltransferase activity IEP HCCA
BP GO:0009058 biosynthetic process IEP HCCA
BP GO:0009059 macromolecule biosynthetic process IEP HCCA
BP GO:0009250 glucan biosynthetic process IEP HCCA
MF GO:0015299 obsolete solute:proton antiporter activity IEP HCCA
CC GO:0016020 membrane IEP HCCA
BP GO:0016051 carbohydrate biosynthetic process IEP HCCA
MF GO:0016740 transferase activity IEP HCCA
MF GO:0016757 glycosyltransferase activity IEP HCCA
MF GO:0016758 hexosyltransferase activity IEP HCCA
BP GO:0033692 cellular polysaccharide biosynthetic process IEP HCCA
BP GO:0034637 cellular carbohydrate biosynthetic process IEP HCCA
BP GO:0034645 cellular macromolecule biosynthetic process IEP HCCA
MF GO:0035251 UDP-glucosyltransferase activity IEP HCCA
BP GO:0044042 glucan metabolic process IEP HCCA
BP GO:0044249 cellular biosynthetic process IEP HCCA
BP GO:0044262 cellular carbohydrate metabolic process IEP HCCA
BP GO:0044264 cellular polysaccharide metabolic process IEP HCCA
MF GO:0046527 glucosyltransferase activity IEP HCCA
BP GO:0051273 beta-glucan metabolic process IEP HCCA
BP GO:0051274 beta-glucan biosynthetic process IEP HCCA
CC GO:0098796 membrane protein complex IEP HCCA
CC GO:0098797 plasma membrane protein complex IEP HCCA
CC GO:0110165 cellular anatomical entity IEP HCCA
BP GO:1901576 organic substance biosynthetic process IEP HCCA
CC GO:1902494 catalytic complex IEP HCCA
CC GO:1990234 transferase complex IEP HCCA
InterPro domains Description Start Stop
IPR019448 NT-C2 11 140
No external refs found!