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  5. GSVIVT01008932001

GSVIVT01008932001 (MCT1)


Aliases : MCT1

Description : Protein terminal ear1 homolog OS=Oryza sativa subsp. indica


Gene families : OG0003402 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003402_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01008932001

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00008p00120470 TEL1,... Protein terminal ear1 homolog OS=Oryza sativa subsp. japonica 0.03 OrthoFinder output from all 47 species
AT1G37140 MCT1 MEI2 C-terminal RRM only like 1 0.07 OrthoFinder output from all 47 species
AT1G67770 TEL2 terminal EAR1-like 2 0.04 OrthoFinder output from all 47 species
AT5G07930 MCT2 MEI2 C-terminal RRM only like 2 0.09 OrthoFinder output from all 47 species
Aspi01Gene40898.t1 TEL1, Aspi01Gene40898 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ceric.02G098500.1 TEL1, Ceric.02G098500 not classified & original description: pacid=50585133... 0.08 OrthoFinder output from all 47 species
Ceric.04G093800.1 MCT1, Ceric.04G093800 not classified & original description: pacid=50631316... 0.04 OrthoFinder output from all 47 species
Ceric.39G026900.1 TEL1, Ceric.39G026900 not classified & original description: pacid=50582960... 0.05 OrthoFinder output from all 47 species
Dde_g31780 MCT2 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Gb_20291 TEL1 Protein terminal ear1 homolog OS=Oryza sativa subsp.... 0.04 OrthoFinder output from all 47 species
LOC_Os01g68000.1 TEL1, LOC_Os01g68000 Protein terminal ear1 homolog OS=Oryza sativa subsp.... 0.03 OrthoFinder output from all 47 species
LOC_Os09g36140.1 TEL1, LOC_Os09g36140 Protein MEI2-like 6 OS=Oryza sativa subsp. japonica... 0.05 OrthoFinder output from all 47 species
Mp1g04100.1 TEL1 Protein terminal ear1 homolog OS=Oryza sativa subsp.... 0.03 OrthoFinder output from all 47 species
Solyc05g056360.2.1 MCT1, Solyc05g056360 Protein terminal ear1 homolog OS=Oryza sativa subsp.... 0.03 OrthoFinder output from all 47 species
Zm00001e018912_P001 TEL1, Zm00001e018912 Protein terminal ear1 OS=Zea mays (sp|o65001|te1_maize : 874.0) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEP HCCA
MF GO:0004180 carboxypeptidase activity IEP HCCA
MF GO:0004185 serine-type carboxypeptidase activity IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0008238 exopeptidase activity IEP HCCA
MF GO:0070008 serine-type exopeptidase activity IEP HCCA
InterPro domains Description Start Stop
IPR007201 Mei2-like_Rrm_C 193 305
No external refs found!