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  5. GSVIVT01008897001

GSVIVT01008897001


Description : Protein degradation.peptide tagging.Ubiquitin (UBQ)-anchor addition (ubiquitylation).UBQ-ligase E3 activities.RING-domain E3 ligase activities.RING-H2-type E3 ligase


Gene families : OG0000101 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000101_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01008897001

Target Alias Description ECC score Gene Family Method Actions
AT1G21960 No alias RING/U-box superfamily protein 0.04 OrthoFinder output from all 47 species
AT3G13228 No alias RING/U-box superfamily protein 0.02 OrthoFinder output from all 47 species
AT5G53910 No alias RING/U-box superfamily protein 0.04 OrthoFinder output from all 47 species
Adi_g003792 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g008105 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g02298 No alias RING-H2-class BTL-subclass E3 ubiquitin ligase &... 0.02 OrthoFinder output from all 47 species
Aev_g05358 No alias RING-H2-class BTL-subclass E3 ubiquitin ligase &... 0.03 OrthoFinder output from all 47 species
Aev_g05960 No alias RING-H2-class BTL-subclass E3 ubiquitin ligase &... 0.05 OrthoFinder output from all 47 species
Als_g05596 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g13383 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g07224 No alias RING-H2-class BTL-subclass E3 ubiquitin ligase &... 0.02 OrthoFinder output from all 47 species
Aob_g12129 No alias RING-H2-class BTL-subclass E3 ubiquitin ligase &... 0.02 OrthoFinder output from all 47 species
Aop_g05631 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene16608.t1 RHC1A, Aspi01Gene16608 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.35G016600.1 Ceric.35G016600 not classified & original description: pacid=50582007... 0.02 OrthoFinder output from all 47 species
Dac_g13726 No alias RING-H2-class BTL-subclass E3 ubiquitin ligase &... 0.03 OrthoFinder output from all 47 species
Dcu_g04690 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g05540 No alias RING-H2-class BTL-subclass E3 ubiquitin ligase &... 0.06 OrthoFinder output from all 47 species
Dde_g05277 No alias RING-H2-class BTL-subclass E3 ubiquitin ligase &... 0.03 OrthoFinder output from all 47 species
Dde_g08219 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Gb_23254 RHC1A Probable E3 ubiquitin-protein ligase RHC1A... 0.04 OrthoFinder output from all 47 species
Lfl_g19818 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g29620 No alias RING-H2-class BTL-subclass E3 ubiquitin ligase &... 0.03 OrthoFinder output from all 47 species
MA_433917g0010 RHC1A Probable E3 ubiquitin-protein ligase RHC1A... 0.05 OrthoFinder output from all 47 species
MA_76949g0010 No alias E3 ubiquitin-protein ligase RZF1 OS=Arabidopsis thaliana... 0.05 OrthoFinder output from all 47 species
MA_816375g0010 RHC1A Probable E3 ubiquitin-protein ligase RHC1A... 0.06 OrthoFinder output from all 47 species
Msp_g34982 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g13707 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g02691 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g23014 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ore_g37982 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g24945 CIP8 RING-H2-class BTL-subclass E3 ubiquitin ligase &... 0.05 OrthoFinder output from all 47 species
Pir_g43109 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g50355 RHC1A RING-H2-class BTL-subclass E3 ubiquitin ligase &... 0.06 OrthoFinder output from all 47 species
Pnu_g13986 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g26717 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g00999 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0036.g011589 No alias not classified & original description: CDS=1-987 0.02 OrthoFinder output from all 47 species
Sam_g17099 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g05878 No alias RING-H2-class BTL-subclass E3 ubiquitin ligase &... 0.04 OrthoFinder output from all 47 species
Tin_g32009 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e038199_P001 RHC1A, Zm00001e038199 Probable E3 ubiquitin-protein ligase RHC1A... 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0061630 ubiquitin protein ligase activity IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR039525 RNF126-like_zinc-ribbon 18 51
IPR001841 Znf_RING 205 247
No external refs found!