1. Home
  2. Species
  3. Vitis vinifera
  4. Sequence
  5. GSVIVT01008841001

GSVIVT01008841001 (RFC3, RFC5)


Aliases : RFC3, RFC5

Description : Cell cycle.interphase.DNA replication.elongation.DNA-tracking platform.PCNA sliding clamp loader complex.RFC5 component


Gene families : OG0005788 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0005788_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01008841001
Cluster HCCA: Cluster_30

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00001085.3 RFC3, RFC5 RNA processing.RNA splicing.U2-type-intron-specific... 0.01 OrthoFinder output from all 47 species
Dac_g02160 RFC3, RFC5 component *(RFC5) of PCNA sliding clamp loader complex &... 0.03 OrthoFinder output from all 47 species
LOC_Os02g53500.1 RFC3, RFC5,... component RFC5 of PCNA sliding clamp loader complex 0.02 OrthoFinder output from all 47 species
Smo235493 RFC3, RFC5 Cell cycle.interphase.DNA... 0.03 OrthoFinder output from all 47 species
Tin_g20633 RFC3, RFC5 component *(RFC5) of PCNA sliding clamp loader complex &... 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
BP GO:0000413 protein peptidyl-prolyl isomerization IEP HCCA
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003755 peptidyl-prolyl cis-trans isomerase activity IEP HCCA
MF GO:0003899 DNA-directed 5'-3' RNA polymerase activity IEP HCCA
BP GO:0006351 DNA-templated transcription IEP HCCA
MF GO:0016859 cis-trans isomerase activity IEP HCCA
BP GO:0018193 peptidyl-amino acid modification IEP HCCA
BP GO:0018208 peptidyl-proline modification IEP HCCA
MF GO:0032977 membrane insertase activity IEP HCCA
MF GO:0034062 5'-3' RNA polymerase activity IEP HCCA
MF GO:0051536 iron-sulfur cluster binding IEP HCCA
MF GO:0051540 metal cluster binding IEP HCCA
BP GO:0097659 nucleic acid-templated transcription IEP HCCA
MF GO:0097747 RNA polymerase activity IEP HCCA
MF GO:0140104 molecular carrier activity IEP HCCA
MF GO:0140597 protein carrier chaperone IEP HCCA
InterPro domains Description Start Stop
IPR003959 ATPase_AAA_core 73 194
IPR013748 Rep_factorC_C 261 347
No external refs found!