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  5. GSVIVT01008834001

GSVIVT01008834001 (BGAL16)


Aliases : BGAL16

Description : Cell wall.pectin.rhamnogalacturonan I.modification and degradation.beta-galactosidase


Gene families : OG0000377 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000377_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01008834001

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00054p00149030 BGAL6, MUM2,... Cell wall.pectin.rhamnogalacturonan I.modification and... 0.05 OrthoFinder output from all 47 species
Aob_g27601 BGAL8 EC_3.2 glycosylase & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.34G073600.1 BGAL3, Ceric.34G073600 EC_3.2 glycosylase & original description:... 0.03 OrthoFinder output from all 47 species
Ceric.37G026600.1 BGAL8, Ceric.37G026600 EC_3.2 glycosylase & original description:... 0.02 OrthoFinder output from all 47 species
Dac_g44528 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g11208 BGAL8 EC_3.2 glycosylase & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01012605001 BGAL10 Cell wall.pectin.rhamnogalacturonan I.modification and... 0.08 OrthoFinder output from all 47 species
GSVIVT01017403001 No alias No description available 0.04 OrthoFinder output from all 47 species
GSVIVT01021066001 BGAL10 Beta-galactosidase 10 OS=Arabidopsis thaliana 0.05 OrthoFinder output from all 47 species
Gb_32359 BGAL8 beta-galactosidase (BGAL) 0.04 OrthoFinder output from all 47 species
Gb_35384 BGAL1 Beta-galactosidase 9 OS=Arabidopsis thaliana... 0.05 OrthoFinder output from all 47 species
Gb_39826 BGAL8 Beta-galactosidase 6 OS=Oryza sativa subsp. japonica... 0.04 OrthoFinder output from all 47 species
Gb_39827 BGAL8 Beta-galactosidase 8 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Ore_g35159 BGAL8 EC_3.2 glycosylase & original description: none 0.03 OrthoFinder output from all 47 species
Solyc01g110000.3.1 BGAL3, Solyc01g110000 beta-galactosidase (BGAL) 0.06 OrthoFinder output from all 47 species
Zm00001e018433_P002 BGAL9, Zm00001e018433 beta-galactosidase (BGAL) 0.03 OrthoFinder output from all 47 species
Zm00001e019757_P001 BGAL15, Zm00001e019757 beta-galactosidase (BGAL) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0030246 carbohydrate binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0005506 iron ion binding IEP HCCA
BP GO:0006720 isoprenoid metabolic process IEP HCCA
BP GO:0008299 isoprenoid biosynthetic process IEP HCCA
BP GO:0008610 lipid biosynthetic process IEP HCCA
MF GO:0016491 oxidoreductase activity IEP HCCA
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP HCCA
MF GO:0020037 heme binding IEP HCCA
MF GO:0043169 cation binding IEP HCCA
BP GO:0044255 cellular lipid metabolic process IEP HCCA
MF GO:0046872 metal ion binding IEP HCCA
MF GO:0046906 tetrapyrrole binding IEP HCCA
MF GO:0046914 transition metal ion binding IEP HCCA
BP GO:0055114 obsolete oxidation-reduction process IEP HCCA
InterPro domains Description Start Stop
IPR000922 Lectin_gal-bd_dom 739 816
IPR031330 Gly_Hdrlase_35_cat 34 341
No external refs found!