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  5. GSVIVT01008795001

GSVIVT01008795001


Description : PHD finger protein EHD3 OS=Oryza sativa subsp. japonica


Gene families : OG0002848 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002848_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01008795001
Cluster HCCA: Cluster_109

Target Alias Description ECC score Gene Family Method Actions
MA_10431108g0010 No alias PHD finger protein EHD3 OS=Oryza sativa subsp. japonica... 0.04 OrthoFinder output from all 47 species
Msp_g15550 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g44188 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e021897_P001 Zm00001e021897 PHD finger protein EHD3 OS=Oryza sativa subsp. japonica... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003883 CTP synthase activity IEP HCCA
MF GO:0005515 protein binding IEP HCCA
BP GO:0006220 pyrimidine nucleotide metabolic process IEP HCCA
BP GO:0006221 pyrimidine nucleotide biosynthetic process IEP HCCA
BP GO:0006996 organelle organization IEP HCCA
BP GO:0007062 sister chromatid cohesion IEP HCCA
BP GO:0007064 mitotic sister chromatid cohesion IEP HCCA
MF GO:0008641 ubiquitin-like modifier activating enzyme activity IEP HCCA
BP GO:0009165 nucleotide biosynthetic process IEP HCCA
MF GO:0016874 ligase activity IEP HCCA
MF GO:0016877 ligase activity, forming carbon-sulfur bonds IEP HCCA
MF GO:0016879 ligase activity, forming carbon-nitrogen bonds IEP HCCA
BP GO:0022402 cell cycle process IEP HCCA
BP GO:0051276 chromosome organization IEP HCCA
BP GO:0072527 pyrimidine-containing compound metabolic process IEP HCCA
BP GO:0072528 pyrimidine-containing compound biosynthetic process IEP HCCA
MF GO:0140657 ATP-dependent activity IEP HCCA
BP GO:1901293 nucleoside phosphate biosynthetic process IEP HCCA
BP GO:1903047 mitotic cell cycle process IEP HCCA
InterPro domains Description Start Stop
IPR019787 Znf_PHD-finger 691 737
IPR019787 Znf_PHD-finger 532 577
No external refs found!