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  5. GSVIVT01008655001

GSVIVT01008655001 (LFY, LFY3)


Aliases : LFY, LFY3

Description : RNA biosynthesis.transcriptional activation.LFY transcription factor


Gene families : OG0004745 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004745_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01008655001
Cluster HCCA: Cluster_24

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00016p00083040 LFY, LFY3,... RNA biosynthesis.transcriptional activation.LFY... 0.05 OrthoFinder output from all 47 species
Aev_g28726 LFY, LFY3 transcription factor *(LEAFY) of floral meristem... 0.02 OrthoFinder output from all 47 species
Aop_g07290 LFY, LFY3 transcription factor *(LEAFY) of floral meristem... 0.04 OrthoFinder output from all 47 species
Dcu_g22728 LFY, LFY3 transcription factor *(LEAFY) of floral meristem... 0.03 OrthoFinder output from all 47 species
Ehy_g22446 LFY, LFY3 transcription factor *(LEAFY) of floral meristem... 0.03 OrthoFinder output from all 47 species
LOC_Os04g51000.1 LFY, LFY3, LOC_Os04g51000 transcription factor (LFY) 0.11 OrthoFinder output from all 47 species
Nbi_g02096 LFY, LFY3 transcription factor *(LEAFY) of floral meristem... 0.04 OrthoFinder output from all 47 species
Spa_g13395 LFY, LFY3 LFY-type transcription factor & original description: none 0.11 OrthoFinder output from all 47 species
Spa_g18235 LFY, LFY3 transcription factor *(LEAFY) of floral meristem... 0.03 OrthoFinder output from all 47 species
Spa_g46662 LFY, LFY3 transcription factor *(LEAFY) of floral meristem... 0.06 OrthoFinder output from all 47 species
Spa_g57285 LFY, LFY3 transcription factor *(LEAFY) of floral meristem... 0.05 OrthoFinder output from all 47 species
Zm00001e007066_P002 LFY, LFY3, Zm00001e007066 transcription factor (LFY) 0.03 OrthoFinder output from all 47 species
Zm00001e041565_P001 LFY, LFY3, Zm00001e041565 transcription factor (LFY) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0006355 regulation of DNA-templated transcription IEP HCCA
BP GO:0009889 regulation of biosynthetic process IEP HCCA
BP GO:0010468 regulation of gene expression IEP HCCA
BP GO:0010556 regulation of macromolecule biosynthetic process IEP HCCA
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP HCCA
BP GO:0019222 regulation of metabolic process IEP HCCA
BP GO:0031323 regulation of cellular metabolic process IEP HCCA
BP GO:0031326 regulation of cellular biosynthetic process IEP HCCA
BP GO:0050789 regulation of biological process IEP HCCA
BP GO:0050794 regulation of cellular process IEP HCCA
BP GO:0051171 regulation of nitrogen compound metabolic process IEP HCCA
BP GO:0051252 regulation of RNA metabolic process IEP HCCA
BP GO:0060255 regulation of macromolecule metabolic process IEP HCCA
BP GO:0065007 biological regulation IEP HCCA
BP GO:0080090 regulation of primary metabolic process IEP HCCA
BP GO:1903506 regulation of nucleic acid-templated transcription IEP HCCA
BP GO:2001141 regulation of RNA biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR035209 FLO/LFY_C 192 358
IPR035079 LFY_SAM 29 105
No external refs found!