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  5. GSVIVT01008631001

GSVIVT01008631001


Description : Vesicle trafficking.endomembrane trafficking.post-Golgi trafficking.SCD complex.SCD2 protein


Gene families : OG0003024 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003024_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01008631001
Cluster HCCA: Cluster_117

Target Alias Description ECC score Gene Family Method Actions
Ala_g11624 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g23061 No alias component *(SCD2)of post-Golgi trafficking SCD complex &... 0.03 OrthoFinder output from all 47 species
LOC_Os11g31950.1 LOC_Os11g31950 SCD2 component of post-Golgi trafficking SCD complex 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0028.g009985 No alias not classified & original description: CDS=162-1658 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0005634 nucleus IEP HCCA
BP GO:0006357 regulation of transcription by RNA polymerase II IEP HCCA
BP GO:0006396 RNA processing IEP HCCA
CC GO:0008023 transcription elongation factor complex IEP HCCA
CC GO:0043226 organelle IEP HCCA
CC GO:0043227 membrane-bounded organelle IEP HCCA
CC GO:0043229 intracellular organelle IEP HCCA
CC GO:0043231 intracellular membrane-bounded organelle IEP HCCA
CC GO:0070449 elongin complex IEP HCCA
CC GO:0140513 nuclear protein-containing complex IEP HCCA

No InterPro domains available for this sequence

No external refs found!