- Species
- Tools
- Expression Profiles
- Compare profiles
- Create heatmap
- Export expression levels
- Expression Specificity
- Compare specificities
- Find specific profiles
- Co-expression Networks
- Create custom network
- Find enriched clusters
- Search
Aliases : MYB54, ATMYB54
Description : RNA biosynthesis.transcriptional activation.MYB superfamily.MYB transcription factor
Gene families : OG0000080 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000080_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: GSVIVT01008484001 | |
| Cluster | HCCA: Cluster_28 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00006p00225600 | MYBR1, MYB44,... | RNA biosynthesis.transcriptional activation.MYB... | 0.05 | OrthoFinder output from all 47 species | |
| AT1G17950 | BW52, ATMYB52, MYB52 | myb domain protein 52 | 0.09 | OrthoFinder output from all 47 species | |
| AT1G26780 | AtMYB117, LOF1, MYB117 | myb domain protein 117 | 0.03 | OrthoFinder output from all 47 species | |
| AT1G69560 | LOF2, MYB105, ATMYB105 | myb domain protein 105 | 0.05 | OrthoFinder output from all 47 species | |
| AT1G73410 | MYB54, ATMYB54 | myb domain protein 54 | 0.1 | OrthoFinder output from all 47 species | |
| AT3G27785 | PGA37, ATMYB118, MYB118 | myb domain protein 118 | 0.06 | OrthoFinder output from all 47 species | |
| AT4G33450 | ATMYB69, MYB69 | myb domain protein 69 | 0.09 | OrthoFinder output from all 47 species | |
| AT5G39700 | MYB89, AtMYB89 | myb domain protein 89 | 0.03 | OrthoFinder output from all 47 species | |
| AT5G40360 | MYB115, AtMYB115 | myb domain protein 115 | 0.04 | OrthoFinder output from all 47 species | |
| Adi_g059961 | MYB70, AtMYB70 | MYB class-R2R3 subgroup-22/23 transcription factor &... | 0.02 | OrthoFinder output from all 47 species | |
| Adi_g074060 | MYB70, AtMYB70 | MYB class-R2R3 subgroup-22/23 transcription factor &... | 0.04 | OrthoFinder output from all 47 species | |
| Adi_g109382 | MYB77 | MYB class-R2R3 subgroup-22/23 transcription factor &... | 0.04 | OrthoFinder output from all 47 species | |
| Aev_g01523 | MYB77 | MYB class-R2R3 subgroup-22/23 transcription factor &... | 0.02 | OrthoFinder output from all 47 species | |
| Aev_g03283 | MYB77 | MYB class-R2R3 subgroup-22/23 transcription factor &... | 0.02 | OrthoFinder output from all 47 species | |
| Aev_g16421 | MYB88, AtMYB88 | MYB class-R2R3 transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aev_g39348 | MYB3R-1,... | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Ala_g09398 | LOF2, MYB105, ATMYB105 | MYB class-R2R3 subgroup-21 transcription factor &... | 0.03 | OrthoFinder output from all 47 species | |
| Ala_g27236 | BW52, ATMYB52, MYB52 | MYB class-R2R3 subgroup-21 transcription factor &... | 0.04 | OrthoFinder output from all 47 species | |
| Ala_g28266 | MYB70, AtMYB70 | MYB class-R2R3 subgroup-22/23 transcription factor &... | 0.03 | OrthoFinder output from all 47 species | |
| Als_g23951 | LOF2, MYB105, ATMYB105 | MYB class-R2R3 subgroup-21 transcription factor &... | 0.05 | OrthoFinder output from all 47 species | |
| Aspi01Gene06474.t1 | MYB77, Aspi01Gene06474 | MYB class-R2R3 subgroup-22/23 transcription factor &... | 0.03 | OrthoFinder output from all 47 species | |
| Azfi_s0001.g000218 | AtMYB117, LOF1, MYB117 | MYB class-R2R3 subgroup-21 transcription factor &... | 0.03 | OrthoFinder output from all 47 species | |
| Azfi_s0130.g049054 | MYB54, ATMYB54 | not classified & original description: CDS=1-720 | 0.03 | OrthoFinder output from all 47 species | |
| Azfi_s0163.g054240 | MYB73, ATMYB73 | MYB class-R2R3 subgroup-22/23 transcription factor &... | 0.03 | OrthoFinder output from all 47 species | |
| Azfi_s0390.g067689 | MYB3R-1,... | R1R2R3-MYB transcription factor & original description:... | 0.03 | OrthoFinder output from all 47 species | |
| Azfi_s1025.g095454 | ATMYB3R5, MYB3R-5 | R1R2R3-MYB transcription factor & original description: CDS=1-468 | 0.03 | OrthoFinder output from all 47 species | |
| Azfi_s3609.g116385 | MYB73, ATMYB73 | not classified & original description: CDS=1-897 | 0.03 | OrthoFinder output from all 47 species | |
| Ceric.19G007400.1 | LOF2, MYB105,... | MYB class-R2R3 subgroup-21 transcription factor &... | 0.05 | OrthoFinder output from all 47 species | |
| Ceric.23G045000.1 | MYBR1, MYB44,... | MYB class-R2R3 subgroup-22/23 transcription factor &... | 0.04 | OrthoFinder output from all 47 species | |
| Dac_g16265 | AtMYB117, LOF1, MYB117 | MYB class-R2R3 subgroup-21 transcription factor &... | 0.03 | OrthoFinder output from all 47 species | |
| Dcu_g43014 | MYB77 | MYB class-R2R3 subgroup-22/23 transcription factor &... | 0.03 | OrthoFinder output from all 47 species | |
| Dde_g28841 | LOF2, MYB105, ATMYB105 | MYB class-R2R3 subgroup-21 transcription factor &... | 0.04 | OrthoFinder output from all 47 species | |
| Ehy_g05787 | MYB77 | MYB class-R2R3 subgroup-22/23 transcription factor &... | 0.03 | OrthoFinder output from all 47 species | |
| Ehy_g12960 | MYB77 | MYB class-R2R3 subgroup-22/23 transcription factor &... | 0.03 | OrthoFinder output from all 47 species | |
| Ehy_g24773 | MYB77 | MYB class-R2R3 subgroup-22/23 transcription factor &... | 0.03 | OrthoFinder output from all 47 species | |
| GSVIVT01007731001 | AtMYB98, MYB98 | RNA biosynthesis.transcriptional activation.MYB... | 0.04 | OrthoFinder output from all 47 species | |
| GSVIVT01024359001 | AtMYB107, MYB107 | RNA biosynthesis.transcriptional activation.MYB... | 0.01 | OrthoFinder output from all 47 species | |
| Gb_01889 | BW52, ATMYB52, MYB52 | transcription factor (MYB) | 0.05 | OrthoFinder output from all 47 species | |
| Gb_06298 | AtMYB117, LOF1, MYB117 | transcription factor (MYB) | 0.03 | OrthoFinder output from all 47 species | |
| Gb_24073 | MYB77 | transcription factor (MYB) | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os01g63680.1 | PGA37, ATMYB118,... | transcription factor (MYB) | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os01g74590.1 | MYBR1, MYB44,... | transcription factor (MYB) | 0.02 | OrthoFinder output from all 47 species | |
| LOC_Os03g51110.1 | BW52, ATMYB52,... | transcription factor (MYB) | 0.06 | OrthoFinder output from all 47 species | |
| LOC_Os06g43090.1 | MYBR1, MYB44,... | transcription factor (MYB) | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os09g01960.1 | MYBR1, MYB44,... | transcription factor (MYB) | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os11g10130.1 | BW52, ATMYB52,... | transcription factor (MYB) | 0.03 | OrthoFinder output from all 47 species | |
| Len_g02343 | LOF2, MYB105, ATMYB105 | MYB class-R2R3 subgroup-21 transcription factor &... | 0.03 | OrthoFinder output from all 47 species | |
| Len_g16435 | ATMYB3R5, MYB3R-5 | R1R2R3-MYB transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Lfl_g06086 | MYB56, AtMYB56 | MYB class-R2R3 subgroup-21 transcription factor &... | 0.03 | OrthoFinder output from all 47 species | |
| Lfl_g25897 | MYB77 | not classified & original description: none | 0.01 | OrthoFinder output from all 47 species | |
| MA_34970g0010 | No alias | no hits & (original description: none) | 0.03 | OrthoFinder output from all 47 species | |
| MA_373893g0010 | AtMYB124, MYB124, FLP | no hits & (original description: none) | 0.02 | OrthoFinder output from all 47 species | |
| Mp1g17210.1 | ATMYB119, MYB119 | transcription factor (MYB) | 0.05 | OrthoFinder output from all 47 species | |
| Mp8g11870.1 | AtMYB117, LOF1, MYB117 | transcription factor (MYB) | 0.04 | OrthoFinder output from all 47 species | |
| Msp_g11561 | MYB77 | MYB class-R2R3 subgroup-22/23 transcription factor &... | 0.05 | OrthoFinder output from all 47 species | |
| Msp_g32001 | LOF2, MYB105, ATMYB105 | MYB class-R2R3 subgroup-21 transcription factor &... | 0.02 | OrthoFinder output from all 47 species | |
| Ore_g13295 | LOF2, MYB105, ATMYB105 | MYB class-R2R3 subgroup-21 transcription factor &... | 0.02 | OrthoFinder output from all 47 species | |
| Ore_g20759 | LOF2, MYB105, ATMYB105 | MYB class-R2R3 subgroup-21 transcription factor &... | 0.02 | OrthoFinder output from all 47 species | |
| Pir_g13372 | LOF2, MYB105, ATMYB105 | MYB class-R2R3 subgroup-21 transcription factor &... | 0.02 | OrthoFinder output from all 47 species | |
| Pnu_g27096 | MYB88, AtMYB88 | MYB class-R2R3 transcription factor & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Pp3c17_19947V3.1 | AtMYB124,... | myb domain protein 88 | 0.02 | OrthoFinder output from all 47 species | |
| Pp3c17_19960V3.1 | Pp3c17_19960 | No annotation | 0.03 | OrthoFinder output from all 47 species | |
| Pp3c18_340V3.1 | LOF2, MYB105,... | myb domain protein 105 | 0.02 | OrthoFinder output from all 47 species | |
| Ppi_g02255 | ATMYB3R5, MYB3R-5 | R1R2R3-MYB transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ppi_g08219 | MYB3R-1,... | R1R2R3-MYB transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ppi_g08288 | LOF2, MYB105, ATMYB105 | MYB class-R2R3 subgroup-21 transcription factor &... | 0.03 | OrthoFinder output from all 47 species | |
| Ppi_g12324 | LOF2, MYB105, ATMYB105 | MYB class-R2R3 subgroup-21 transcription factor &... | 0.02 | OrthoFinder output from all 47 species | |
| Ppi_g12915 | AtMYB124, MYB124, FLP | MYB class-R2R3 transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ppi_g14529 | LOF2, MYB105, ATMYB105 | MYB class-R2R3 subgroup-21 transcription factor &... | 0.02 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0001.g000153 | MYB56, AtMYB56 | MYB class-R2R3 subgroup-21 transcription factor &... | 0.03 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0005.g002693 | MYB56, AtMYB56 | not classified & original description: CDS=2737-4053 | 0.03 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0096.g019382 | MYB73, ATMYB73 | MYB class-R2R3 subgroup-22/23 transcription factor &... | 0.03 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0129.g021926 | LOF2, MYB105, ATMYB105 | MYB class-R2R3 subgroup-21 transcription factor &... | 0.03 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0272.g027032 | AtMYB124, MYB124, FLP | MYB class-R2R3 transcription factor & original... | 0.03 | OrthoFinder output from all 47 species | |
| Smo6091 | AtMYB117, LOF1, MYB117 | RNA biosynthesis.transcriptional activation.MYB... | 0.03 | OrthoFinder output from all 47 species | |
| Solyc03g098270.1.1 | LOF2, MYB105,... | no hits & (original description: none) | 0.11 | OrthoFinder output from all 47 species | |
| Solyc03g112890.1.1 | AtMYB98, MYB98,... | transcription factor (MYB) | 0.04 | OrthoFinder output from all 47 species | |
| Solyc04g005710.3.1 | AtMYB124,... | transcription factor (MYB) | 0.11 | OrthoFinder output from all 47 species | |
| Solyc05g007160.3.1 | MYB88, AtMYB88,... | transcription factor (MYB) | 0.02 | OrthoFinder output from all 47 species | |
| Solyc05g007870.3.1 | LOF2, MYB105,... | transcription factor (MYB) | 0.03 | OrthoFinder output from all 47 species | |
| Solyc05g052850.3.1 | AtMYB109,... | transcription factor (MYB) | 0.01 | OrthoFinder output from all 47 species | |
| Spa_g12777 | AtMYB117, LOF1, MYB117 | MYB class-R2R3 subgroup-21 transcription factor &... | 0.03 | OrthoFinder output from all 47 species | |
| Spa_g16125 | LOF2, MYB105, ATMYB105 | MYB class-R2R3 subgroup-21 transcription factor &... | 0.03 | OrthoFinder output from all 47 species | |
| Spa_g16126 | MYB56, AtMYB56 | MYB class-R2R3 subgroup-21 transcription factor &... | 0.05 | OrthoFinder output from all 47 species | |
| Spa_g41684 | LOF2, MYB105, ATMYB105 | MYB class-R2R3 subgroup-21 transcription factor &... | 0.03 | OrthoFinder output from all 47 species | |
| Tin_g12262 | MYB3R-1,... | R1R2R3-MYB transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Tin_g13864 | AtMYB124, MYB124, FLP | MYB class-R2R3 transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Tin_g23248 | LOF2, MYB105, ATMYB105 | MYB class-R2R3 subgroup-21 transcription factor &... | 0.02 | OrthoFinder output from all 47 species | |
| Tin_g43768 | LOF2, MYB105, ATMYB105 | MYB class-R2R3 subgroup-21 transcription factor &... | 0.03 | OrthoFinder output from all 47 species | |
| Zm00001e005044_P002 | ATMYB119,... | transcription factor (MYB) | 0.06 | OrthoFinder output from all 47 species | |
| Zm00001e005507_P001 | BW52, ATMYB52,... | transcription factor (MYB) | 0.05 | OrthoFinder output from all 47 species | |
| Zm00001e017365_P001 | LOF2, MYB105,... | transcription factor (MYB) | 0.01 | OrthoFinder output from all 47 species | |
| Zm00001e018391_P001 | MYB54, ATMYB54,... | transcription factor (MYB) | 0.04 | OrthoFinder output from all 47 species | |
| Zm00001e030480_P001 | MYBR1, MYB44,... | transcription factor (MYB) | 0.02 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003824 | catalytic activity | IEP | HCCA |
| MF | GO:0004175 | endopeptidase activity | IEP | HCCA |
| MF | GO:0004252 | serine-type endopeptidase activity | IEP | HCCA |
| MF | GO:0005506 | iron ion binding | IEP | HCCA |
| BP | GO:0006508 | proteolysis | IEP | HCCA |
| BP | GO:0006952 | defense response | IEP | HCCA |
| MF | GO:0008233 | peptidase activity | IEP | HCCA |
| MF | GO:0008236 | serine-type peptidase activity | IEP | HCCA |
| MF | GO:0016491 | oxidoreductase activity | IEP | HCCA |
| MF | GO:0016705 | oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen | IEP | HCCA |
| MF | GO:0017171 | serine hydrolase activity | IEP | HCCA |
| BP | GO:0019538 | protein metabolic process | IEP | HCCA |
| MF | GO:0020037 | heme binding | IEP | HCCA |
| MF | GO:0043169 | cation binding | IEP | HCCA |
| MF | GO:0046872 | metal ion binding | IEP | HCCA |
| MF | GO:0046906 | tetrapyrrole binding | IEP | HCCA |
| MF | GO:0046914 | transition metal ion binding | IEP | HCCA |
| BP | GO:0055114 | obsolete oxidation-reduction process | IEP | HCCA |
| MF | GO:0140096 | catalytic activity, acting on a protein | IEP | HCCA |
| No external refs found! |