GSVIVT01008453001 (JAI3, JAZ3, TIFY6B)


Aliases : JAI3, JAZ3, TIFY6B

Description : RNA biosynthesis.transcriptional activation.TIFY transcription factor


Gene families : OG0000154 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000154_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01008453001

Target Alias Description ECC score Gene Family Method Actions
Als_g11586 JAZ12, TIFY3B TIFY-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Als_g44446 JAZ9, TIFY7 TIFY-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene47147.t2 TIFY10A, JAZ1,... TIFY-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Ceric.07G034300.1 Ceric.07G034300 not classified & original description: pacid=50627732... 0.03 OrthoFinder output from all 47 species
Ceric.34G003800.1 JAI3, JAZ3,... not classified & original description: pacid=50623143... 0.03 OrthoFinder output from all 47 species
Dac_g03073 TIFY10A, JAZ1 TIFY-type transcription factor & original description: none 0.06 OrthoFinder output from all 47 species
MA_10436815g0010 JAZ12, TIFY3B transcription factor (TIFY) 0.03 OrthoFinder output from all 47 species
Nbi_g12620 JAZ4, TIFY6A TIFY-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g05782 JAZ4, TIFY6A TIFY-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g23723 JAI3, JAZ3, TIFY6B TIFY-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g56550 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g18266 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0005506 iron ion binding IEP HCCA
MF GO:0016491 oxidoreductase activity IEP HCCA
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP HCCA
MF GO:0020037 heme binding IEP HCCA
MF GO:0043169 cation binding IEP HCCA
MF GO:0046872 metal ion binding IEP HCCA
MF GO:0046906 tetrapyrrole binding IEP HCCA
MF GO:0046914 transition metal ion binding IEP HCCA
BP GO:0055114 obsolete oxidation-reduction process IEP HCCA
InterPro domains Description Start Stop
IPR018467 CCT_CS 307 332
IPR010399 Tify_dom 202 232
No external refs found!