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  5. GSVIVT01008276001

GSVIVT01008276001


Description : Carbon catabolite repressor protein 4 homolog 5 OS=Arabidopsis thaliana


Gene families : OG0001632 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001632_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01008276001
Cluster HCCA: Cluster_93

Target Alias Description ECC score Gene Family Method Actions
Als_g15956 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g11948 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g18806 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
BP GO:0001522 pseudouridine synthesis IEP HCCA
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
MF GO:0003899 DNA-directed 5'-3' RNA polymerase activity IEP HCCA
BP GO:0006351 DNA-templated transcription IEP HCCA
MF GO:0008897 holo-[acyl-carrier-protein] synthase activity IEP HCCA
BP GO:0009451 RNA modification IEP HCCA
MF GO:0009982 pseudouridine synthase activity IEP HCCA
BP GO:0016070 RNA metabolic process IEP HCCA
MF GO:0016780 phosphotransferase activity, for other substituted phosphate groups IEP HCCA
MF GO:0016866 intramolecular transferase activity IEP HCCA
MF GO:0034062 5'-3' RNA polymerase activity IEP HCCA
BP GO:0090304 nucleic acid metabolic process IEP HCCA
BP GO:0097659 nucleic acid-templated transcription IEP HCCA
MF GO:0097747 RNA polymerase activity IEP HCCA
InterPro domains Description Start Stop
IPR005135 Endo/exonuclease/phosphatase 61 237
No external refs found!