GSVIVT01008260001 (SCD1)


Aliases : SCD1

Description : Vesicle trafficking.endomembrane trafficking.post-Golgi trafficking.SCD complex.SCD1 protein


Gene families : OG0004472 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004472_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01008260001

Target Alias Description ECC score Gene Family Method Actions
AT1G49040 SCD1 stomatal cytokinesis defective / SCD1 protein (SCD1) 0.07 OrthoFinder output from all 47 species
Als_g05136 SCD1 component *(SCD1)of post-Golgi trafficking SCD complex &... 0.04 OrthoFinder output from all 47 species
Aob_g10698 SCD1 component *(SCD1)of post-Golgi trafficking SCD complex &... 0.04 OrthoFinder output from all 47 species
Aspi01Gene31787.t1 SCD1, Aspi01Gene31787 not classified & original description: none 0.06 OrthoFinder output from all 47 species
Ceric.26G004000.1 SCD1, Ceric.26G004000 component *(SCD1)of post-Golgi trafficking SCD complex &... 0.06 OrthoFinder output from all 47 species
Dcu_g06506 SCD1 component *(SCD1)of post-Golgi trafficking SCD complex &... 0.08 OrthoFinder output from all 47 species
Dde_g03996 SCD1 component *(SCD1)of post-Golgi trafficking SCD complex &... 0.07 OrthoFinder output from all 47 species
Ehy_g26018 SCD1 component *(SCD1)of post-Golgi trafficking SCD complex &... 0.02 OrthoFinder output from all 47 species
LOC_Os01g39380.1 SCD1, LOC_Os01g39380 SCD1 component of post-Golgi trafficking SCD complex 0.08 OrthoFinder output from all 47 species
Lfl_g05730 SCD1 component *(SCD1)of post-Golgi trafficking SCD complex &... 0.03 OrthoFinder output from all 47 species
Mp5g20500.1 SCD1 SCD1 component of post-Golgi trafficking SCD complex 0.04 OrthoFinder output from all 47 species
Ore_g18307 SCD1 component *(SCD1)of post-Golgi trafficking SCD complex &... 0.02 OrthoFinder output from all 47 species
Smo118822 SCD1 Vesicle trafficking.endomembrane trafficking.post-Golgi... 0.04 OrthoFinder output from all 47 species
Zm00001e020506_P001 SCD1, Zm00001e020506 SCD1 component of post-Golgi trafficking SCD complex 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
Type GO Term Name Evidence Source
MF GO:0003980 UDP-glucose:glycoprotein glucosyltransferase activity IEP HCCA
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP HCCA
MF GO:0004559 alpha-mannosidase activity IEP HCCA
MF GO:0004565 beta-galactosidase activity IEP HCCA
BP GO:0005975 carbohydrate metabolic process IEP HCCA
BP GO:0005996 monosaccharide metabolic process IEP HCCA
BP GO:0006013 mannose metabolic process IEP HCCA
BP GO:0006486 protein glycosylation IEP HCCA
CC GO:0009341 beta-galactosidase complex IEP HCCA
MF GO:0015923 mannosidase activity IEP HCCA
MF GO:0015925 galactosidase activity IEP HCCA
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP HCCA
BP GO:0019318 hexose metabolic process IEP HCCA
MF GO:0035251 UDP-glucosyltransferase activity IEP HCCA
BP GO:0043413 macromolecule glycosylation IEP HCCA
BP GO:0070085 glycosylation IEP HCCA
InterPro domains Description Start Stop
IPR005113 uDENN_dom 36 103
IPR001194 cDENN_dom 124 290
IPR001680 WD40_repeat 896 943
IPR001680 WD40_repeat 990 1026
IPR001680 WD40_repeat 953 985
IPR001680 WD40_repeat 1073 1108
No external refs found!