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  5. GSVIVT01008258001

GSVIVT01008258001 (CASP, AtCASP)


Aliases : CASP, AtCASP

Description : Vesicle trafficking.target membrane tethering.Golgi membrane tethering factors.CASP-type golgin


Gene families : OG0004640 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004640_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01008258001

Target Alias Description ECC score Gene Family Method Actions
AT3G18480 CASP, AtCASP CCAAT-displacement protein alternatively spliced product 0.03 OrthoFinder output from all 47 species
Als_g01937 CASP, AtCASP Golgin-type membrane tethering protein *(CASP) &... 0.04 OrthoFinder output from all 47 species
Aspi01Gene50596.t1 CASP, AtCASP,... Golgin-type membrane tethering protein *(CASP) &... 0.03 OrthoFinder output from all 47 species
Aspi01Gene50599.t1 CASP, AtCASP,... Golgin-type membrane tethering protein *(CASP) &... 0.03 OrthoFinder output from all 47 species
Cre04.g223900 CASP, AtCASP No description available 0.02 OrthoFinder output from all 47 species
Cre08.g382650 CASP, AtCASP Vesicle trafficking.target membrane tethering.Golgi... 0.02 OrthoFinder output from all 47 species
Dde_g12908 CASP, AtCASP Golgin-type membrane tethering protein *(CASP) &... 0.04 OrthoFinder output from all 47 species
LOC_Os03g50300.1 CASP, AtCASP,... golgin (CASP) 0.04 OrthoFinder output from all 47 species
Len_g00690 CASP, AtCASP Golgin-type membrane tethering protein *(CASP) &... 0.02 OrthoFinder output from all 47 species
MA_4188g0010 CASP, AtCASP golgin (CASP) 0.02 OrthoFinder output from all 47 species
Nbi_g04869 CASP, AtCASP Golgin-type membrane tethering protein *(CASP) &... 0.03 OrthoFinder output from all 47 species
Ppi_g14626 CASP, AtCASP Golgin-type membrane tethering protein *(CASP) &... 0.04 OrthoFinder output from all 47 species
Smo173154 CASP, AtCASP Vesicle trafficking.target membrane tethering.Golgi... 0.03 OrthoFinder output from all 47 species
Solyc06g069210.3.1 CASP, AtCASP,... golgin (CASP) 0.06 OrthoFinder output from all 47 species
Tin_g20724 CASP, AtCASP Golgin-type membrane tethering protein *(CASP) &... 0.02 OrthoFinder output from all 47 species
Zm00001e012195_P001 CASP, AtCASP,... golgin (CASP) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
BP GO:0006891 intra-Golgi vesicle-mediated transport IEA Interproscan
CC GO:0030173 obsolete integral component of Golgi membrane IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0000145 exocyst IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005515 protein binding IEP HCCA
MF GO:0005543 phospholipid binding IEP HCCA
CC GO:0005737 cytoplasm IEP HCCA
BP GO:0006476 protein deacetylation IEP HCCA
BP GO:0006807 nitrogen compound metabolic process IEP HCCA
BP GO:0006886 intracellular protein transport IEP HCCA
BP GO:0006887 exocytosis IEP HCCA
MF GO:0008289 lipid binding IEP HCCA
MF GO:0008565 obsolete protein transporter activity IEP HCCA
BP GO:0016570 histone modification IEP HCCA
BP GO:0016575 histone deacetylation IEP HCCA
BP GO:0016579 protein deubiquitination IEP HCCA
BP GO:0019538 protein metabolic process IEP HCCA
BP GO:0032940 secretion by cell IEP HCCA
MF GO:0035091 phosphatidylinositol binding IEP HCCA
BP GO:0035601 protein deacylation IEP HCCA
BP GO:0036211 protein modification process IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
BP GO:0043412 macromolecule modification IEP HCCA
BP GO:0046903 secretion IEP HCCA
BP GO:0070646 protein modification by small protein removal IEP HCCA
BP GO:0070647 protein modification by small protein conjugation or removal IEP HCCA
BP GO:0098732 macromolecule deacylation IEP HCCA
CC GO:0099023 vesicle tethering complex IEP HCCA
BP GO:0140352 export from cell IEP HCCA
BP GO:1901564 organonitrogen compound metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR012955 CASP_C 421 647
No external refs found!