GSVIVT01008234001 (TCP12, BRC2)


Aliases : TCP12, BRC2

Description : RNA biosynthesis.transcriptional activation.TCP transcription factor


Gene families : OG0000529 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000529_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01008234001

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00007p00041830 TCP10,... RNA biosynthesis.transcriptional activation.TCP... 0.04 OrthoFinder output from all 47 species
AMTR_s00154p00072430 TCP13, TFPD,... RNA biosynthesis.transcriptional activation.TCP... 0.08 OrthoFinder output from all 47 species
Adi_g101936 TCP10 TCP-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g07892 TCP3 TCP-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g18903 TCP3 TCP-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g07553 TCP3 TCP-type transcription factor & original description: none 0.06 OrthoFinder output from all 47 species
Aspi01Gene02917.t2 TCP3, Aspi01Gene02917 TCP-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene27741.t1 TCP2, Aspi01Gene27741 TCP-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene43428.t1 TCP17, Aspi01Gene43428 TCP-type transcription factor & original description: none 0.05 OrthoFinder output from all 47 species
Aspi01Gene50266.t1 TCP2, Aspi01Gene50266 TCP-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene55173.t1 TCP2, Aspi01Gene55173 TCP-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene64947.t1 TCP3, Aspi01Gene64947 TCP-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0168.g054602 TCP3 TCP-type transcription factor & original description: CDS=18-1559 0.04 OrthoFinder output from all 47 species
Cba_g22010 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ceric.37G069500.1 TCP2, Ceric.37G069500 TCP-type transcription factor & original description:... 0.04 OrthoFinder output from all 47 species
GSVIVT01008109001 TCP5 RNA biosynthesis.transcriptional activation.TCP... 0.06 OrthoFinder output from all 47 species
GSVIVT01011962001 TCP12, BRC2 RNA biosynthesis.transcriptional activation.TCP... 0.1 OrthoFinder output from all 47 species
Gb_30049 TCP2 transcription factor (TCP) 0.04 OrthoFinder output from all 47 species
Gb_35810 TCP2 transcription factor (TCP) 0.04 OrthoFinder output from all 47 species
Gb_37187 TCP3 transcription factor (TCP) 0.04 OrthoFinder output from all 47 species
Gb_38376 TCP2 transcription factor (TCP) 0.04 OrthoFinder output from all 47 species
LOC_Os03g57190.1 ATTCP24, TCP24,... transcription factor (TCP) 0.07 OrthoFinder output from all 47 species
LOC_Os05g43760.1 TCP5, LOC_Os05g43760 transcription factor (TCP) 0.05 OrthoFinder output from all 47 species
LOC_Os09g24480.1 BRC1, ATTCP18,... transcription factor (TCP) 0.03 OrthoFinder output from all 47 species
MA_75780g0010 TCP2 transcription factor (TCP) 0.04 OrthoFinder output from all 47 species
Pnu_g26630 TCP2 TCP-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Pnu_g26727 TCP13, TFPD, PTF1 TCP-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Smo89227 TCP2 RNA biosynthesis.transcriptional activation.TCP... 0.04 OrthoFinder output from all 47 species
Solyc01g016414.1.1 TCP10, Solyc01g016414 transcription factor (TCP) 0.02 OrthoFinder output from all 47 species
Solyc02g077250.2.1 TCP4, MEE35,... transcription factor (TCP) 0.04 OrthoFinder output from all 47 species
Solyc02g089020.2.1 TCP13, TFPD,... transcription factor (TCP) 0.04 OrthoFinder output from all 47 species
Solyc04g006980.1.1 TCP12, BRC2,... transcription factor (TCP) 0.04 OrthoFinder output from all 47 species
Solyc05g009900.3.1 TCP12, BRC2,... transcription factor (TCP) 0.04 OrthoFinder output from all 47 species
Solyc06g069460.3.1 TCP5, Solyc06g069460 transcription factor (TCP) 0.06 OrthoFinder output from all 47 species
Solyc10g008780.1.1 TCP10, Solyc10g008780 transcription factor (TCP) 0.05 OrthoFinder output from all 47 species
Spa_g11170 TCP2 TCP-type transcription factor & original description: none 0.06 OrthoFinder output from all 47 species
Spa_g55051 No alias not classified & original description: none 0.14 OrthoFinder output from all 47 species
Zm00001e005407_P001 TCP12, BRC2,... transcription factor (TCP) 0.04 OrthoFinder output from all 47 species
Zm00001e005909_P001 TCP2, Zm00001e005909 transcription factor (TCP) 0.03 OrthoFinder output from all 47 species
Zm00001e011516_P001 TCP2, Zm00001e011516 transcription factor (TCP) 0.03 OrthoFinder output from all 47 species
Zm00001e032122_P001 TCP5, Zm00001e032122 transcription factor (TCP) 0.04 OrthoFinder output from all 47 species
Zm00001e032821_P001 TCP2, Zm00001e032821 transcription factor (TCP) 0.06 OrthoFinder output from all 47 species
Zm00001e034097_P001 BRC1, ATTCP18,... transcription factor (TCP) 0.03 OrthoFinder output from all 47 species
Zm00001e035648_P002 ATTCP24, TCP24,... transcription factor (TCP) 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0008146 sulfotransferase activity IEP HCCA
MF GO:0016782 transferase activity, transferring sulphur-containing groups IEP HCCA
MF GO:0016788 hydrolase activity, acting on ester bonds IEP HCCA
InterPro domains Description Start Stop
IPR017887 TF_TCP_subgr 137 203
No external refs found!