GSVIVT01008206001 (TGH)

Aliases : TGH

Description : RNA biosynthesis.RNA polymerase II-dependent transcription.miRNA biogenesis.DCL1-HYL1 miRNA biogenesis complex.TOUGH component

Gene families : OG0004570 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004570_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: GSVIVT01008206001

Target	Alias	Description	ECC score	Gene Family Method
Aev_g35036	TGH	component *(TOUGH) of DCL1-HYL1 miRNA biogenesis complex...	0.02	OrthoFinder output from all 47 species
Ala_g12092	TGH	component *(TOUGH) of DCL1-HYL1 miRNA biogenesis complex...	0.03	OrthoFinder output from all 47 species
Cba_g12614	TGH	component *(TOUGH) of DCL1-HYL1 miRNA biogenesis complex...	0.03	OrthoFinder output from all 47 species
Ceric.03G041500.1	TGH, Ceric.03G041500	component *(TOUGH) of DCL1-HYL1 miRNA biogenesis complex...	0.05	OrthoFinder output from all 47 species
Cpa\|evm.model.tig00020848.29	TGH	RNA biosynthesis.RNA polymerase II-dependent...	0.02	OrthoFinder output from all 47 species
Cre13.g568700	TGH	RNA biosynthesis.RNA polymerase II-dependent...	0.02	OrthoFinder output from all 47 species
LOC_Os06g29400.1	TGH, LOC_Os06g29400	component TOUGH of DCL1-HYL1 miRNA biogenesis complex	0.03	OrthoFinder output from all 47 species
Lfl_g10031	TGH	component *(TOUGH) of DCL1-HYL1 miRNA biogenesis complex...	0.03	OrthoFinder output from all 47 species
MA_10431106g0020	TGH	component TOUGH of DCL1-HYL1 miRNA biogenesis complex	0.04	OrthoFinder output from all 47 species
Pir_g10423	TGH	component *(TOUGH) of DCL1-HYL1 miRNA biogenesis complex...	0.04	OrthoFinder output from all 47 species
Pnu_g07723	TGH	component *(TOUGH) of DCL1-HYL1 miRNA biogenesis complex...	0.02	OrthoFinder output from all 47 species
Solyc03g114410.3.1	TGH, Solyc03g114410	component TOUGH of DCL1-HYL1 miRNA biogenesis complex	0.04	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003723	RNA binding	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
BP	GO:0006139	nucleobase-containing compound metabolic process	None	Extended
BP	GO:0006396	RNA processing	IEA	Interproscan
BP	GO:0006725	cellular aromatic compound metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0016070	RNA metabolic process	None	Extended
BP	GO:0034641	cellular nitrogen compound metabolic process	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0046483	heterocycle metabolic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:0090304	nucleic acid metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
BP	GO:1901360	organic cyclic compound metabolic process	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR011666	DUF1604	39	113
IPR000061	Surp	407	454

External Links

No external refs found!