LOC_Os11g43740 (Os11g0658700)


Aliases : Os11g0658700

Description : 27.3.24 RNA.regulation of transcription.MADS box transcription factor family Encodes a member of the MIKC (MADS box, Keratin binding domain, and C terminal domain containing )family of transcriptional regulators. AGL65 is expressed in pollen.It forms heterodimers with other MICK family members (AGL104). Involved in late stages of pollen development and pollen tube growth. AGAMOUS-like 65 (AGL65) BEST Arabidopsis thaliana protein match is: AGAMOUS-like 30 (TAIR:AT2G03060.2) Has 35333


Gene families : OG_01_0000006 (Gene family) Phylogenetic Tree(s): OG0000006_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): LOC_Os11g43740
Cluster HCCA cluster: Cluster_51

Target Alias Description ECC score Gene Family Method Actions
AT1G18750 AGL65 AGAMOUS-like 65 0.02 Gene family
AT1G77980 AGL66 AGAMOUS-like 66 0.03 Gene family
AT4G09960 STK, AGL11 K-box region and MADS-box transcription factor family protein 0.02 Gene family
GSVIVT01015641001 No alias 33.99 development.unspecified Encodes a nuclear protein... 0.02 Gene family
GSVIVT01018446001 No alias No description available 0.03 Gene family
GSVIVT01021534001 No alias 27.3.24 RNA.regulation of transcription.MADS box... 0.02 Gene family
GSVIVT01022182001 No alias 27.3.24 RNA.regulation of transcription.MADS box... 0.11 Gene family
GSVIVT01033253001 No alias No description available 0.02 Gene family
GSVIVT01037034001 No alias 27.3.24 RNA.regulation of transcription.MADS box... 0.02 Gene family
LOC_Os08g38590 Os08g0494100 27.3.24 RNA.regulation of transcription.MADS box... 0.07 Gene family
MA_211156g0010 No alias 33.99 development.unspecified Floral homeotic gene... 0.02 Gene family
MA_25342g0010 No alias 27.3.24 RNA.regulation of transcription.MADS box... 0.03 Gene family
MA_69370g0010 No alias 27.3.24 RNA.regulation of transcription.MADS box... 0.03 Gene family
MA_899014g0010 No alias No description available 0.02 Gene family
Solyc02g065730.2.1 Solyc02g065730.2 33.99 development.unspecified MADS box gene negatively... 0.02 Gene family
Solyc05g051830.3.1 Solyc05g051830.3 27.3.24 RNA.regulation of transcription.MADS box... 0.07 Gene family
Solyc11g045310.2.1 Solyc11g045310.2 33.99 development.unspecified Encodes a member of the... 0.09 Gene family
Solyc12g056460.2.1 Solyc12g056460.2 No description available 0.03 Gene family
Zm00001d016957 GRMZM2G316366,... 27.3.24 RNA.regulation of transcription.MADS box... 0.02 Gene family
Zm00001d027957 GRMZM2G059102 33.99 development.unspecified Encodes a nuclear protein... 0.02 Gene family
Zm00001d031620 GRMZM2G159397 27.3.24 RNA.regulation of transcription.MADS box... 0.02 Gene family
Zm00001d044850 GRMZM2G152415 27.3.24 RNA.regulation of transcription.MADS box... 0.04 Gene family

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA InterProScan
MF GO:0046983 protein dimerization activity IEA InterProScan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR002100 TF_MADSbox 11 54
No external refs found!