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  5. GSVIVT01008104001

GSVIVT01008104001 (AFP3)


Aliases : AFP3

Description : RNA biosynthesis.transcriptional repression.AFP/NINJA transcriptional co-repressor


Gene families : OG0001010 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001010_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01008104001
Cluster HCCA: Cluster_38

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00154p00057990 AFP2,... RNA biosynthesis.transcriptional repression.AFP/NINJA... 0.03 OrthoFinder output from all 47 species
AT1G13740 AFP2 ABI five binding protein 2 0.01 OrthoFinder output from all 47 species
AT1G69260 AFP1 ABI five binding protein 0.04 OrthoFinder output from all 47 species
Aev_g35216 AFP3 transcriptional co-repressor *(AFP/NINJA) & original... 0.02 OrthoFinder output from all 47 species
Cba_g13965 AFP3 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dac_g27786 NINJA not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g01983 AFP3 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g22899 AFP3 not classified & original description: none 0.02 OrthoFinder output from all 47 species
LOC_Os01g68820.1 LOC_Os01g68820 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
LOC_Os07g41160.1 AFP3, LOC_Os07g41160 transcriptional co-repressor (AFP/NINJA) 0.04 OrthoFinder output from all 47 species
MA_16384g0010 AFP3 transcriptional co-repressor (AFP/NINJA) 0.01 OrthoFinder output from all 47 species
Msp_g26340 AFP3 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g25344 AFP3 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g30872 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g41860 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Pnu_g32749 NINJA not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0003.g001786 NINJA transcriptional co-repressor *(AFP/NINJA) & original... 0.04 OrthoFinder output from all 47 species
Solyc02g030633.1.1 AFP3, Solyc02g030633 transcriptional co-repressor (AFP/NINJA) 0.02 OrthoFinder output from all 47 species
Solyc02g066855.1.1 AFP3, Solyc02g066855 transcriptional co-repressor (AFP/NINJA) 0.06 OrthoFinder output from all 47 species
Solyc02g066905.1.1 AFP2, Solyc02g066905 transcriptional co-repressor (AFP/NINJA) 0.02 OrthoFinder output from all 47 species
Solyc02g150115.1.1 AFP2, Solyc02g150115 transcriptional co-repressor (AFP/NINJA) 0.03 OrthoFinder output from all 47 species
Solyc04g005380.3.1 AFP2, Solyc04g005380 transcriptional co-repressor (AFP/NINJA) 0.02 OrthoFinder output from all 47 species
Spa_g07383 NINJA not classified & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g31839 AFP3 not classified & original description: none 0.01 OrthoFinder output from all 47 species
Zm00001e035495_P001 AFP3, Zm00001e035495 transcriptional co-repressor (AFP/NINJA) 0.02 OrthoFinder output from all 47 species
Zm00001e038719_P006 AFP2, Zm00001e038719 transcriptional co-repressor (AFP/NINJA) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
BP GO:0006508 proteolysis IEP HCCA
MF GO:0008061 chitin binding IEP HCCA
MF GO:0008233 peptidase activity IEP HCCA
MF GO:0016787 hydrolase activity IEP HCCA
MF GO:0045735 nutrient reservoir activity IEP HCCA
InterPro domains Description Start Stop
IPR032308 TDBD 924 983
No external refs found!