GSVIVT01008042001 (ATH1, ATATH1, ABCA2)

Aliases : ATH1, ATATH1, ABCA2

Description : Solute transport.primary active transport.ABC superfamily.ABC2 family.subfamily ABCA transporter

Gene families : OG0001787 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001787_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: GSVIVT01008042001

Target	Alias	Description	ECC score	Gene Family Method
Aop_g63310	ATH1, ATATH1, ABCA2	fatty acid transporter *(ABCA) & original description: none	0.02	OrthoFinder output from all 47 species
Cpa\|evm.model.tig00000057.66	ATH1, ATATH1, ABCA2	ABC transporter A family member 2 OS=Arabidopsis thaliana	0.02	OrthoFinder output from all 47 species
Cre03.g151400	ABCA1, AtABCA1	Solute transport.primary active transport.ABC...	0.02	OrthoFinder output from all 47 species
Cre14.g613950	ATH1, ATATH1, ABCA2	ABC transporter A family member 2 OS=Arabidopsis thaliana	0.05	OrthoFinder output from all 47 species
Len_g49231	ATH1, ATATH1, ABCA2	subfamily ABCA transporter & original description: none	0.03	OrthoFinder output from all 47 species
MA_10004022g0010	ATH15, ATATH15	ABC transporter A family member 11 OS=Arabidopsis...	0.03	OrthoFinder output from all 47 species
Mp7g18500.1	ATH1, ATATH1, ABCA2	fatty acid transporter (ABCA). subfamily ABCA transporter	0.02	OrthoFinder output from all 47 species
Ore_g34266	ATH1, ATATH1, ABCA2	subfamily ABCA transporter & original description: none	0.03	OrthoFinder output from all 47 species
Solyc06g070960.3.1	ATH1, ATATH1,...	fatty acid transporter (ABCA). subfamily ABCA transporter	0.03	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005524	ATP binding	IEA	Interproscan
MF	GO:0016462	pyrophosphatase activity	None	Extended
MF	GO:0016787	hydrolase activity	None	Extended
MF	GO:0016817	hydrolase activity, acting on acid anhydrides	None	Extended
MF	GO:0016818	hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides	None	Extended
MF	GO:0016887	ATP hydrolysis activity	IEA	Interproscan
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0017111	ribonucleoside triphosphate phosphatase activity	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
MF	GO:0015399	primary active transmembrane transporter activity	IEP	HCCA
MF	GO:0022804	active transmembrane transporter activity	IEP	HCCA
MF	GO:0042626	ATPase-coupled transmembrane transporter activity	IEP	HCCA
MF	GO:0140657	ATP-dependent activity	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR003439	ABC_transporter-like_ATP-bd	547	691

External Links

No external refs found!