1. Home
  2. Species
  3. Vitis vinifera
  4. Sequence
  5. GSVIVT01008034001

GSVIVT01008034001


Description : RNA biosynthesis.transcriptional activation.bHLH transcription factor


Gene families : OG0009654 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0009654_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01008034001

Target Alias Description ECC score Gene Family Method Actions
AT1G26945 KDR basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.05 OrthoFinder output from all 47 species
AT3G47710 BNQ3, BHLH161 BANQUO 3 0.04 OrthoFinder output from all 47 species
AT5G15160 BNQ2, BHLH134 BANQUO 2 0.04 OrthoFinder output from all 47 species
GSVIVT01008030001 No alias RNA biosynthesis.transcriptional activation.bHLH... 0.06 OrthoFinder output from all 47 species
GSVIVT01011380001 No alias RNA biosynthesis.transcriptional activation.bHLH... 0.04 OrthoFinder output from all 47 species
LOC_Os03g07540.1 LOC_Os03g07540 transcription factor (bHLH) 0.06 OrthoFinder output from all 47 species
LOC_Os10g26460.1 LOC_Os10g26460 transcription factor (bHLH) 0.07 OrthoFinder output from all 47 species
MA_156285g0010 KDR transcription factor (bHLH) 0.02 OrthoFinder output from all 47 species
Solyc02g067380.4.1 KDR, Solyc02g067380 transcription factor (bHLH) 0.03 OrthoFinder output from all 47 species
Solyc04g005660.4.1 KDR, Solyc04g005660 transcription factor (bHLH) 0.04 OrthoFinder output from all 47 species
Zm00001e000536_P001 KDR, Zm00001e000536 transcription factor (bHLH) 0.04 OrthoFinder output from all 47 species
Zm00001e023896_P001 KDR, Zm00001e023896 transcription factor (bHLH) 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0046983 protein dimerization activity IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0005215 transporter activity IEP HCCA
MF GO:0005506 iron ion binding IEP HCCA
BP GO:0006811 monoatomic ion transport IEP HCCA
BP GO:0006812 monoatomic cation transport IEP HCCA
MF GO:0008324 monoatomic cation transmembrane transporter activity IEP HCCA
MF GO:0015075 monoatomic ion transmembrane transporter activity IEP HCCA
MF GO:0015318 inorganic molecular entity transmembrane transporter activity IEP HCCA
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP HCCA
MF GO:0020037 heme binding IEP HCCA
MF GO:0022857 transmembrane transporter activity IEP HCCA
MF GO:0022890 inorganic cation transmembrane transporter activity IEP HCCA
BP GO:0030001 metal ion transport IEP HCCA
MF GO:0046873 metal ion transmembrane transporter activity IEP HCCA
MF GO:0046906 tetrapyrrole binding IEP HCCA
BP GO:0055085 transmembrane transport IEP HCCA
InterPro domains Description Start Stop
IPR011598 bHLH_dom 19 59
No external refs found!