GSVIVT01008001001

Description : Protein degradation.peptide tagging.Ubiquitin (UBQ)-anchor addition (ubiquitylation).UBQ-ligase E3 activities.RING-domain E3 ligase activities.RING-v-type E3 ligase

Gene families : OG0000370 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000370_tree

Sequence : coding (download), protein (download)

Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: GSVIVT01008001001

Target	Alias	Description	ECC score	Gene Family Method
AT1G14260	No alias	RING/FYVE/PHD zinc finger superfamily protein	0.04	OrthoFinder output from all 47 species
AT3G47550	No alias	RING/FYVE/PHD zinc finger superfamily protein	0.04	OrthoFinder output from all 47 species
Ala_g14258	No alias	E3 ubiquitin ligase & original description: none	0.03	OrthoFinder output from all 47 species
Cre09.g400738	No alias	Protein degradation.peptide tagging.Ubiquitin...	0.02	OrthoFinder output from all 47 species
Ehy_g22283	No alias	E3 ubiquitin ligase & original description: none	0.05	OrthoFinder output from all 47 species
Len_g56643	No alias	E3 ubiquitin ligase & original description: none	0.03	OrthoFinder output from all 47 species
Msp_g06322	No alias	E3 ubiquitin ligase & original description: none	0.03	OrthoFinder output from all 47 species
Pir_g45666	No alias	E3 ubiquitin ligase & original description: none	0.06	OrthoFinder output from all 47 species
Sam_g07092	No alias	E3 ubiquitin ligase & original description: none	0.03	OrthoFinder output from all 47 species
Solyc03g116030.4.1	Solyc03g116030	RING-v-class E3 ligase	0.03	OrthoFinder output from all 47 species
Solyc08g014080.4.1	Solyc08g014080	RING-v-class E3 ligase	0.03	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0008270	zinc ion binding	IEA	Interproscan
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043169	cation binding	None	Extended
MF	GO:0046872	metal ion binding	None	Extended
MF	GO:0046914	transition metal ion binding	None	Extended

Toggle parental

Type	GO Term	Name	Evidence	Source
MF	GO:0004842	ubiquitin-protein transferase activity	IEP	HCCA
MF	GO:0016462	pyrophosphatase activity	IEP	HCCA
BP	GO:0016567	protein ubiquitination	IEP	HCCA
MF	GO:0016817	hydrolase activity, acting on acid anhydrides	IEP	HCCA
MF	GO:0016818	hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides	IEP	HCCA
MF	GO:0016887	ATP hydrolysis activity	IEP	HCCA
MF	GO:0017111	ribonucleoside triphosphate phosphatase activity	IEP	HCCA
MF	GO:0019787	ubiquitin-like protein transferase activity	IEP	HCCA
BP	GO:0032446	protein modification by small protein conjugation	IEP	HCCA
BP	GO:0070647	protein modification by small protein conjugation or removal	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR011016	Znf_RING-CH	72	117
IPR022143	DUF3675	123	240

External Links

No external refs found!

GSVIVT01008001001

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation