GSVIVT01007937001 (OTP82)

Aliases : OTP82

Description : Pentatricopeptide repeat-containing protein At1g08070, chloroplastic OS=Arabidopsis thaliana

Gene families : OG0074187 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: GSVIVT01007937001
Cluster	HCCA: Cluster_105

Target	Alias	Description	ECC score	Gene Family Method	Actions
Solyc03g115570.1.1	OTP85, Solyc03g115570	Pentatricopeptide repeat-containing protein At2g02980,...	0.08	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0008270	zinc ion binding	IEA	Interproscan
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043169	cation binding	None	Extended
MF	GO:0046872	metal ion binding	None	Extended
MF	GO:0046914	transition metal ion binding	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR002885	Pentatricopeptide_repeat	110	138
IPR002885	Pentatricopeptide_repeat	382	406
IPR002885	Pentatricopeptide_repeat	307	356
IPR002885	Pentatricopeptide_repeat	207	254
IPR032867	DYW_dom	481	604

External Links

No external refs found!