Aliases : HDA6, RTS1, ATHDA6, SIL1, RPD3B, AXE1
Description : Chromatin organisation.histone modifications.histone deacetylation.HD1 histone deacetylase family.class-I histone deacetylase
Gene families : OG0000827 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000827_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
Ceric.07G097000.1 | ATHDA19, HDA1,... | EC_3.5 hydrolase acting on carbon-nitrogen bond, other... | 0.02 | OrthoFinder output from all 47 species | |
Ceric.25G049900.1 | ATHDA19, HDA1,... | EC_3.5 hydrolase acting on carbon-nitrogen bond, other... | 0.02 | OrthoFinder output from all 47 species | |
Cpa|evm.model.tig00000215.121 | ATHDA19, HDA1,... | Chromatin organisation.histone modifications.histone... | 0.02 | OrthoFinder output from all 47 species | |
Dcu_g04892 | ATHDA19, HDA1,... | EC_3.5 hydrolase acting on carbon-nitrogen bond, other... | 0.04 | OrthoFinder output from all 47 species | |
LOC_Os08g25570.1 | HDA6, RTS1,... | class-I histone deacetylase | 0.03 | OrthoFinder output from all 47 species | |
Pir_g05454 | ATHDA19, HDA1,... | EC_3.5 hydrolase acting on carbon-nitrogen bond, other... | 0.03 | OrthoFinder output from all 47 species | |
Pir_g43104 | ATHDA19, HDA1,... | EC_3.5 hydrolase acting on carbon-nitrogen bond, other... | 0.02 | OrthoFinder output from all 47 species |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
No GO annotation available for this sequence |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
CC | GO:0008303 | caspase complex | IEP | HCCA |
BP | GO:0016255 | attachment of GPI anchor to protein | IEP | HCCA |
CC | GO:0032991 | protein-containing complex | IEP | HCCA |
BP | GO:0036211 | protein modification process | IEP | HCCA |
CC | GO:0042765 | GPI-anchor transamidase complex | IEP | HCCA |
BP | GO:0043412 | macromolecule modification | IEP | HCCA |
CC | GO:0098796 | membrane protein complex | IEP | HCCA |
CC | GO:0140534 | endoplasmic reticulum protein-containing complex | IEP | HCCA |
CC | GO:1902494 | catalytic complex | IEP | HCCA |
CC | GO:1905368 | peptidase complex | IEP | HCCA |
CC | GO:1905369 | endopeptidase complex | IEP | HCCA |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR023801 | His_deacetylse_dom | 41 | 230 |
No external refs found! |