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Description : Cell wall.pectin.modification and degradation.pectate lyase
Gene families : OG0000492 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000492_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00120p00111300 | evm_27.TU.AmTr_v1... | Cell wall.pectin.modification and degradation.pectate lyase | 0.04 | OrthoFinder output from all 47 species | |
| AT3G07010 | No alias | Pectin lyase-like superfamily protein | 0.03 | OrthoFinder output from all 47 species | |
| AT4G22090 | No alias | Pectin lyase-like superfamily protein | 0.04 | OrthoFinder output from all 47 species | |
| AT5G48900 | No alias | Pectin lyase-like superfamily protein | 0.05 | OrthoFinder output from all 47 species | |
| Aev_g19777 | No alias | EC_4.2 carbon-oxygen lyase & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aev_g38995 | RHS14 | EC_4.2 carbon-oxygen lyase & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aob_g23901 | RHS14 | EC_4.2 carbon-oxygen lyase & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aob_g32431 | RHS14 | EC_4.2 carbon-oxygen lyase & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aop_g13674 | No alias | EC_4.2 carbon-oxygen lyase & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Aop_g20815 | No alias | EC_4.2 carbon-oxygen lyase & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Aop_g21580 | No alias | EC_4.2 carbon-oxygen lyase & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Azfi_s0054.g033628 | RHS14 | EC_4.2 carbon-oxygen lyase & original description: CDS=168-1388 | 0.03 | OrthoFinder output from all 47 species | |
| Azfi_s0161.g054099 | No alias | EC_4.2 carbon-oxygen lyase & original description: CDS=131-1402 | 0.04 | OrthoFinder output from all 47 species | |
| Ceric.05G036500.1 | Ceric.05G036500 | EC_4.2 carbon-oxygen lyase & original description:... | 0.02 | OrthoFinder output from all 47 species | |
| Ceric.32G027600.1 | Ceric.32G027600 | EC_4.2 carbon-oxygen lyase & original description:... | 0.07 | OrthoFinder output from all 47 species | |
| Dcu_g43009 | No alias | EC_4.2 carbon-oxygen lyase & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Dde_g46389 | No alias | EC_4.2 carbon-oxygen lyase & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Ehy_g03524 | No alias | EC_4.2 carbon-oxygen lyase & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ehy_g03656 | No alias | EC_4.2 carbon-oxygen lyase & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| GSVIVT01014682001 | No alias | Cell wall.pectin.modification and degradation.pectate lyase | 0.04 | OrthoFinder output from all 47 species | |
| GSVIVT01028548001 | No alias | Cell wall.pectin.modification and degradation.pectate lyase | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os04g05050.1 | LOC_Os04g05050 | pectate lyase | 0.03 | OrthoFinder output from all 47 species | |
| MA_103716g0010 | No alias | pectate lyase | 0.03 | OrthoFinder output from all 47 species | |
| MA_10429028g0020 | No alias | pectate lyase | 0.03 | OrthoFinder output from all 47 species | |
| MA_10430145g0030 | No alias | pectate lyase | 0.05 | OrthoFinder output from all 47 species | |
| MA_10437227g0030 | No alias | pectate lyase | 0.03 | OrthoFinder output from all 47 species | |
| Ore_g26214 | No alias | EC_4.2 carbon-oxygen lyase & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ore_g42589 | No alias | EC_4.2 carbon-oxygen lyase & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Sam_g03369 | No alias | EC_4.2 carbon-oxygen lyase & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Sam_g16922 | No alias | EC_4.2 carbon-oxygen lyase & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Solyc02g093580.4.1 | Solyc02g093580 | pectate lyase | 0.03 | OrthoFinder output from all 47 species | |
| Solyc03g111690.4.1 | Solyc03g111690 | pectate lyase | 0.03 | OrthoFinder output from all 47 species | |
| Solyc06g071840.3.1 | Solyc06g071840 | Probable pectate lyase 22 OS=Arabidopsis thaliana... | 0.04 | OrthoFinder output from all 47 species | |
| Tin_g09317 | No alias | EC_4.2 carbon-oxygen lyase & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Zm00001e004654_P002 | Zm00001e004654 | pectate lyase | 0.04 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No Predicted GO terms available for this sequence |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR002022 | Pec_lyase | 137 | 320 |
| No external refs found! |