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  5. GSVIVT01007550001

GSVIVT01007550001 (ARR11)


Aliases : ARR11

Description : RNA biosynthesis.transcriptional activation.ARR-B transcription factor


Gene families : OG0000124 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000124_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01007550001

Target Alias Description ECC score Gene Family Method Actions
AT1G67710 ARR11 response regulator 11 0.03 OrthoFinder output from all 47 species
AT4G31920 ARR10, RR10 response regulator 10 0.05 OrthoFinder output from all 47 species
AT5G05090 No alias Homeodomain-like superfamily protein 0.07 OrthoFinder output from all 47 species
AT5G58080 RR18, ARR18 response regulator 18 0.03 OrthoFinder output from all 47 species
Adi_g048194 ARR11 subgroup ARR-B transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g080127 No alias MYB-RELATED transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g080128 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g04595 LUX, PCL1 component *(LUX) of circadian clock Evening complex (EC)... 0.02 OrthoFinder output from all 47 species
Aev_g08573 ARR11 subgroup ARR-B transcription factor & original description: none 0.05 OrthoFinder output from all 47 species
Als_g51877 ARR1, RR1 subgroup ARR-B transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g13893 ARR11 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.14G062100.1 RR12, ARR12,... subgroup ARR-B transcription factor & original... 0.02 OrthoFinder output from all 47 species
Ceric.21G058200.1 RR12, ARR12,... subgroup ARR-B transcription factor & original... 0.02 OrthoFinder output from all 47 species
Dac_g02359 ARR1, RR1 subgroup ARR-B transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g06166 ARR1, RR1 subgroup ARR-B transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Ehy_g08391 LUX, PCL1 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g26693 ARR1, RR1 subgroup ARR-B transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01024916001 LUX, PCL1 Multi-process regulation.circadian clock.evening element... 0.04 OrthoFinder output from all 47 species
LOC_Os01g67770.1 ARR11, LOC_Os01g67770 B-type cytokinin ARR response activator. transcription... 0.03 OrthoFinder output from all 47 species
LOC_Os02g55320.1 RR12, ARR12,... B-type cytokinin ARR response activator. transcription... 0.07 OrthoFinder output from all 47 species
LOC_Os06g08440.1 RR12, ARR12,... B-type cytokinin ARR response activator. transcription... 0.05 OrthoFinder output from all 47 species
LOC_Os10g32600.1 RR14, ARR14,... Two-component response regulator EHD1 OS=Oryza sativa... 0.04 OrthoFinder output from all 47 species
Msp_g15114 MYBC1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g24147 ARR1, RR1 subgroup ARR-B transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g26540 ARR11 subgroup ARR-B transcription factor & original description: none 0.05 OrthoFinder output from all 47 species
Msp_g35598 ARR1, RR1 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g34775 LUX, PCL1 MYB-RELATED transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g00968 LUX, PCL1 component *(LUX) of circadian clock Evening complex (EC)... 0.02 OrthoFinder output from all 47 species
Pir_g20416 ARR11 subgroup ARR-B transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g26712 ARR1, RR1 subgroup ARR-B transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0331.g027260 No alias component *(LUX) of circadian clock Evening complex (EC)... 0.02 OrthoFinder output from all 47 species
Sam_g39543 No alias subgroup ARR-B transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Solyc01g065540.3.1 ARR1, RR1, Solyc01g065540 B-type cytokinin ARR response activator. transcription... 0.04 OrthoFinder output from all 47 species
Spa_g10934 ARR1, RR1 subgroup ARR-B transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g47537 ARR11 subgroup ARR-B transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Zm00001e016123_P001 RR12, ARR12,... B-type cytokinin ARR response activator. transcription... 0.04 OrthoFinder output from all 47 species
Zm00001e018927_P001 ARR11, Zm00001e018927 B-type cytokinin ARR response activator. transcription... 0.05 OrthoFinder output from all 47 species
Zm00001e028539_P002 ARR11, Zm00001e028539 B-type cytokinin ARR response activator. transcription... 0.06 OrthoFinder output from all 47 species
Zm00001e030516_P001 RR12, ARR12,... no hits & (original description: none) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
BP GO:0000160 phosphorelay signal transduction system IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0000148 1,3-beta-D-glucan synthase complex IEP HCCA
BP GO:0000271 polysaccharide biosynthetic process IEP HCCA
MF GO:0003843 1,3-beta-D-glucan synthase activity IEP HCCA
BP GO:0005976 polysaccharide metabolic process IEP HCCA
BP GO:0006073 cellular glucan metabolic process IEP HCCA
BP GO:0006074 (1->3)-beta-D-glucan metabolic process IEP HCCA
BP GO:0006075 (1->3)-beta-D-glucan biosynthetic process IEP HCCA
MF GO:0008194 UDP-glycosyltransferase activity IEP HCCA
MF GO:0008483 transaminase activity IEP HCCA
BP GO:0009250 glucan biosynthetic process IEP HCCA
BP GO:0016051 carbohydrate biosynthetic process IEP HCCA
BP GO:0016192 vesicle-mediated transport IEP HCCA
MF GO:0016769 transferase activity, transferring nitrogenous groups IEP HCCA
MF GO:0019842 vitamin binding IEP HCCA
MF GO:0030170 pyridoxal phosphate binding IEP HCCA
BP GO:0033692 cellular polysaccharide biosynthetic process IEP HCCA
BP GO:0034637 cellular carbohydrate biosynthetic process IEP HCCA
MF GO:0035251 UDP-glucosyltransferase activity IEP HCCA
BP GO:0044042 glucan metabolic process IEP HCCA
BP GO:0044262 cellular carbohydrate metabolic process IEP HCCA
BP GO:0044264 cellular polysaccharide metabolic process IEP HCCA
MF GO:0046527 glucosyltransferase activity IEP HCCA
MF GO:0046983 protein dimerization activity IEP HCCA
BP GO:0051273 beta-glucan metabolic process IEP HCCA
BP GO:0051274 beta-glucan biosynthetic process IEP HCCA
MF GO:0070279 vitamin B6 binding IEP HCCA
CC GO:0098796 membrane protein complex IEP HCCA
CC GO:0098797 plasma membrane protein complex IEP HCCA
CC GO:1902494 catalytic complex IEP HCCA
CC GO:1990234 transferase complex IEP HCCA
InterPro domains Description Start Stop
IPR001789 Sig_transdc_resp-reg_receiver 19 127
IPR001005 SANT/Myb 172 222
No external refs found!