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  5. GSVIVT01007532001

GSVIVT01007532001 (RGA2, GAI)


Aliases : RGA2, GAI

Description : RNA biosynthesis.transcriptional activation.GRAS transcription factor


Gene families : OG0001108 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001108_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01007532001
Cluster HCCA: Cluster_125

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00004p00270570 RGL2,... External stimuli response.biotic... 0.05 OrthoFinder output from all 47 species
AMTR_s00010p00148880 RGA, RGA1,... RNA biosynthesis.transcriptional activation.GRAS... 0.02 OrthoFinder output from all 47 species
AMTR_s00016p00207840 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.GRAS... 0.03 OrthoFinder output from all 47 species
AT1G66350 RGL1, RGL RGA-like 1 0.04 OrthoFinder output from all 47 species
Adi_g082189 RGL1, RGL GRAS-type transcription factor *(RAD1) & original... 0.03 OrthoFinder output from all 47 species
Ala_g27684 RGL1, RGL GRAS-type transcription factor *(RAD1) & original... 0.05 OrthoFinder output from all 47 species
Aob_g19932 RGL1, RGL GRAS-type transcription factor *(RAD1) & original... 0.05 OrthoFinder output from all 47 species
Aob_g22059 SCR, SGR1 GRAS-type transcription factor *(RAD1) & original... 0.06 OrthoFinder output from all 47 species
Aob_g27908 RGL1, RGL GRAS-type transcription factor *(RAD1) & original... 0.04 OrthoFinder output from all 47 species
Aspi01Gene68508.t1 RGA2, GAI,... transcription factor *(DELLA) & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0460.g072066 RGA2, GAI GRAS-type transcription factor & original description: CDS=1-2034 0.03 OrthoFinder output from all 47 species
Dac_g38769 SCR, SGR1 GRAS-type transcription factor *(RAD1) & original... 0.03 OrthoFinder output from all 47 species
Gb_25388 RGL1, RGL transcription factor (GRAS). RAD1 GRAS-type transcription factor 0.03 OrthoFinder output from all 47 species
LOC_Os05g49930.1 RGA2, GAI, LOC_Os05g49930 DELLA-type gibberellin signal transducer. transcription... 0.03 OrthoFinder output from all 47 species
LOC_Os11g31100.1 RGL1, RGL, LOC_Os11g31100 DELLA-type gibberellin signal transducer. transcription... 0.06 OrthoFinder output from all 47 species
Len_g27753 RGL1, RGL GRAS-type transcription factor *(RAD1) & original... 0.02 OrthoFinder output from all 47 species
Len_g48752 RGL1, RGL GRAS-type transcription factor & original description: none 0.05 OrthoFinder output from all 47 species
Msp_g35839 RGL1, RGL GRAS-type transcription factor *(RAD1) & original... 0.03 OrthoFinder output from all 47 species
Msp_g38765 SCR, SGR1 GRAS-type transcription factor *(RAD1) & original... 0.04 OrthoFinder output from all 47 species
Nbi_g20507 RGA2, GAI transcription factor *(DELLA) & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g03910 RGL1, RGL GRAS-type transcription factor *(RAD1) & original... 0.02 OrthoFinder output from all 47 species
Ore_g26688 RGA, RGA1 GRAS-type transcription factor & original description: none 0.05 OrthoFinder output from all 47 species
Ore_g27974 RGL1, RGL GRAS-type transcription factor *(RAD1) & original... 0.04 OrthoFinder output from all 47 species
Ore_g29234 RGL1, RGL GRAS-type transcription factor *(RAD1) & original... 0.04 OrthoFinder output from all 47 species
Ore_g33996 RGL1, RGL GRAS-type transcription factor *(RAD1) & original... 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0005.g002822 RGA, RGA1 transcription factor *(DELLA) & original description: CDS=1-2391 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0075.g017422 RGA2, GAI GRAS-type transcription factor & original description: CDS=1-1875 0.03 OrthoFinder output from all 47 species
Tin_g40110 RGL1, RGL GRAS-type transcription factor *(RAD1) & original... 0.04 OrthoFinder output from all 47 species
Zm00001e026589_P001 RGA2, GAI, Zm00001e026589 transcription factor (GRAS) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0004857 enzyme inhibitor activity IEP HCCA
MF GO:0004866 endopeptidase inhibitor activity IEP HCCA
MF GO:0004867 serine-type endopeptidase inhibitor activity IEP HCCA
BP GO:0009611 response to wounding IEP HCCA
MF GO:0010181 FMN binding IEP HCCA
MF GO:0016491 oxidoreductase activity IEP HCCA
MF GO:0030414 peptidase inhibitor activity IEP HCCA
BP GO:0055114 obsolete oxidation-reduction process IEP HCCA
MF GO:0061134 peptidase regulator activity IEP HCCA
MF GO:0061135 endopeptidase regulator activity IEP HCCA
MF GO:0140678 molecular function inhibitor activity IEP HCCA
InterPro domains Description Start Stop
IPR005202 TF_GRAS 328 490
No external refs found!