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  5. GSVIVT01007226001

GSVIVT01007226001


No description available


Gene families : OG0005493 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0005493_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01007226001

Target Alias Description ECC score Gene Family Method Actions
AT3G01160 No alias FUNCTIONS IN: molecular_function unknown; INVOLVED IN:... 0.08 OrthoFinder output from all 47 species
Adi_g054865 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g52629 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.24G052900.1 Ceric.24G052900 not classified & original description: pacid=50628958... 0.06 OrthoFinder output from all 47 species
Cpa|evm.model.tig00001428.2 No alias No description available 0.04 OrthoFinder output from all 47 species
Cre10.g452500 No alias No description available 0.07 OrthoFinder output from all 47 species
Dcu_g07705 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
LOC_Os07g34740.1 LOC_Os07g34740 no hits & (original description: none) 0.07 OrthoFinder output from all 47 species
MA_9632g0010 No alias no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
Mp1g25070.1 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Smo268496 No alias No description available 0.05 OrthoFinder output from all 47 species
Smo268642 No alias No description available 0.03 OrthoFinder output from all 47 species
Solyc02g083470.3.1 Solyc02g083470 no hits & (original description: none) 0.07 OrthoFinder output from all 47 species
Spa_g08975 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Zm00001e035150_P001 Zm00001e035150 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
CC GO:0005634 nucleus IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000413 protein peptidyl-prolyl isomerization IEP HCCA
MF GO:0000774 adenyl-nucleotide exchange factor activity IEP HCCA
BP GO:0001522 pseudouridine synthesis IEP HCCA
MF GO:0003755 peptidyl-prolyl cis-trans isomerase activity IEP HCCA
CC GO:0005732 sno(s)RNA-containing ribonucleoprotein complex IEP HCCA
BP GO:0006139 nucleobase-containing compound metabolic process IEP HCCA
BP GO:0006364 rRNA processing IEP HCCA
BP GO:0006457 protein folding IEP HCCA
BP GO:0006605 protein targeting IEP HCCA
BP GO:0006612 protein targeting to membrane IEP HCCA
BP GO:0006613 cotranslational protein targeting to membrane IEP HCCA
BP GO:0006614 SRP-dependent cotranslational protein targeting to membrane IEP HCCA
BP GO:0006886 intracellular protein transport IEP HCCA
MF GO:0008312 7S RNA binding IEP HCCA
BP GO:0009451 RNA modification IEP HCCA
BP GO:0016070 RNA metabolic process IEP HCCA
BP GO:0016072 rRNA metabolic process IEP HCCA
MF GO:0016859 cis-trans isomerase activity IEP HCCA
BP GO:0018193 peptidyl-amino acid modification IEP HCCA
BP GO:0018208 peptidyl-proline modification IEP HCCA
BP GO:0022613 ribonucleoprotein complex biogenesis IEP HCCA
CC GO:0030684 preribosome IEP HCCA
CC GO:0032040 small-subunit processome IEP HCCA
CC GO:0032991 protein-containing complex IEP HCCA
BP GO:0033365 protein localization to organelle IEP HCCA
CC GO:0034457 Mpp10 complex IEP HCCA
BP GO:0034470 ncRNA processing IEP HCCA
BP GO:0042254 ribosome biogenesis IEP HCCA
MF GO:0042802 identical protein binding IEP HCCA
MF GO:0042803 protein homodimerization activity IEP HCCA
BP GO:0044085 cellular component biogenesis IEP HCCA
BP GO:0045047 protein targeting to ER IEP HCCA
CC GO:0048500 signal recognition particle IEP HCCA
MF GO:0051087 chaperone binding IEP HCCA
MF GO:0051536 iron-sulfur cluster binding IEP HCCA
MF GO:0051540 metal cluster binding IEP HCCA
BP GO:0051668 localization within membrane IEP HCCA
MF GO:0060590 ATPase regulator activity IEP HCCA
BP GO:0070972 protein localization to endoplasmic reticulum IEP HCCA
BP GO:0072594 establishment of protein localization to organelle IEP HCCA
BP GO:0072599 establishment of protein localization to endoplasmic reticulum IEP HCCA
BP GO:0072657 protein localization to membrane IEP HCCA
BP GO:0090150 establishment of protein localization to membrane IEP HCCA
BP GO:0090304 nucleic acid metabolic process IEP HCCA
CC GO:0140513 nuclear protein-containing complex IEP HCCA
CC GO:1990904 ribonucleoprotein complex IEP HCCA
InterPro domains Description Start Stop
IPR012580 NUC153 582 605
No external refs found!