1. Home
  2. Species
  3. Vitis vinifera
  4. Sequence
  5. GSVIVT01006909001

GSVIVT01006909001 (COX2)


Aliases : COX2

Description : Cytochrome c oxidase subunit 2 OS=Glycine max


Gene families : OG0003824 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003824_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01006909001
Cluster HCCA: Cluster_59

Target Alias Description ECC score Gene Family Method Actions
AMTR_s05659p00000220 evm_27.TU.AmTr_v1... No description available 0.05 OrthoFinder output from all 47 species
ATMG00160 COX2 cytochrome oxidase 2 0.07 OrthoFinder output from all 47 species
ATMG01280 ORF291 Cytochrome C oxidase subunit II-like, transmembrane domain 0.08 OrthoFinder output from all 47 species
Aop_g31753 COX2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.1Z125800.1 Ceric.1Z125800 not classified & original description: pacid=50604566... 0.1 OrthoFinder output from all 47 species
Ceric.1Z126200.1 COX2, Ceric.1Z126200 not classified & original description: pacid=50604572... 0.09 OrthoFinder output from all 47 species
Ceric.1Z257900.1 COX2, Ceric.1Z257900 not classified & original description: pacid=50586471... 0.03 OrthoFinder output from all 47 species
Ceric.1Z261900.1 COX2, Ceric.1Z261900 not classified & original description: pacid=50628405... 0.11 OrthoFinder output from all 47 species
Ceric.1Z314100.1 Ceric.1Z314100 not classified & original description: pacid=50567672... 0.1 OrthoFinder output from all 47 species
Ceric.1Z318500.1 Ceric.1Z318500 not classified & original description: pacid=50579280... 0.1 OrthoFinder output from all 47 species
Cre03.g154350 COX2 Cytochrome c oxidase subunit 2 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
Dde_g09391 COX2 component *(COX2) of cytochrome c oxidase complex &... 0.04 OrthoFinder output from all 47 species
Gb_08948 COX2 Cytochrome c oxidase subunit 2 OS=Beta vulgaris... 0.05 OrthoFinder output from all 47 species
Gb_17977 COX2 Cytochrome c oxidase subunit 2 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Gb_34804 No alias Cytochrome c oxidase subunit 2 OS=Glycine max... 0.11 OrthoFinder output from all 47 species
MA_10435550g0020 COX2 Cytochrome c oxidase subunit 2 OS=Oryza sativa subsp.... 0.04 OrthoFinder output from all 47 species
MA_10436044g0020 COX2 Cytochrome c oxidase subunit 2 OS=Beta vulgaris... 0.04 OrthoFinder output from all 47 species
Mp4g18480.1 No alias Cytochrome c oxidase subunit 2 OS=Marchantia polymorpha... 0.08 OrthoFinder output from all 47 species
Nbi_g26482 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Pir_g05198 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Pir_g61967 COX2 component *(COX2) of cytochrome c oxidase complex &... 0.05 OrthoFinder output from all 47 species
Smo38815 No alias Cytochrome c oxidase subunit 2 OS=Marchantia polymorpha 0.02 OrthoFinder output from all 47 species
Solyc00g500101.1.1 COX2, Solyc00g500101 Cytochrome c oxidase subunit 2 OS=Beta vulgaris... 0.07 OrthoFinder output from all 47 species
Solyc00g500118.1.1 COX2, Solyc00g500118 Cytochrome c oxidase subunit 2 OS=Beta vulgaris... 0.07 OrthoFinder output from all 47 species
Solyc00g500244.1.1 COX2, Solyc00g500244 Cytochrome c oxidase subunit 2 OS=Beta vulgaris... 0.07 OrthoFinder output from all 47 species
Solyc00g500275.1.1 COX2, Solyc00g500275 Cytochrome c oxidase subunit 2 OS=Beta vulgaris... 0.07 OrthoFinder output from all 47 species
Solyc00g500359.1.1 COX2, Solyc00g500359 Cytochrome c oxidase subunit 2 OS=Beta vulgaris... 0.07 OrthoFinder output from all 47 species
Solyc03g063780.1.1 RPL16, Solyc03g063780 60S ribosomal protein L16, mitochondrial OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
Spa_g21715 COX2 not classified & original description: none 0.06 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
BP GO:0022900 electron transport chain IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
CC GO:0005739 mitochondrion IEP HCCA
MF GO:0016491 oxidoreductase activity IEP HCCA
MF GO:0016651 oxidoreductase activity, acting on NAD(P)H IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
MF GO:0048038 quinone binding IEP HCCA
MF GO:0051287 NAD binding IEP HCCA
BP GO:0055114 obsolete oxidation-reduction process IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
InterPro domains Description Start Stop
IPR002429 CcO_II-like_C 81 203
IPR011759 Cyt_c_oxidase_su2_TM_dom 2 67
No external refs found!