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  5. GSVIVT01006716001

GSVIVT01006716001 (ATSYP124, SYP124)


Aliases : ATSYP124, SYP124

Description : Vesicle trafficking.SNARE target membrane recognition and fusion complexes.Qa-type SNARE components.SYP1-group protein


Gene families : OG0000392 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000392_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01006716001

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00103p00119740 SYP111,... Vesicle trafficking.SNARE target membrane recognition... 0.02 OrthoFinder output from all 47 species
AMTR_s00111p00136390 ATSYP124,... Vesicle trafficking.SNARE target membrane recognition... 0.08 OrthoFinder output from all 47 species
AT1G11250 SYP125, ATSYP125 syntaxin of plants 125 0.05 OrthoFinder output from all 47 species
AT3G03800 ATSYP131, SYP131 syntaxin of plants 131 0.07 OrthoFinder output from all 47 species
AT4G03330 SYP123, ATSYP123 syntaxin of plants 123 0.05 OrthoFinder output from all 47 species
Aspi01Gene00477.t1 SYP125,... Qa-type SYP1-group component of SNARE membrane fusion... 0.04 OrthoFinder output from all 47 species
Aspi01Gene03950.t1 ATSYP124,... Qa-type SYP1-group component of SNARE membrane fusion... 0.03 OrthoFinder output from all 47 species
Azfi_s0056.g034156 ATSYP124, SYP124 Qa-type SYP1-group component of SNARE membrane fusion... 0.04 OrthoFinder output from all 47 species
Azfi_s0059.g034575 SYP132, ATSYP132 Qa-type SYP1-group component of SNARE membrane fusion... 0.03 OrthoFinder output from all 47 species
Azfi_s0220.g058684 SYP125, ATSYP125 Qa-type SYP1-group component of SNARE membrane fusion... 0.03 OrthoFinder output from all 47 species
Cba_g10610 ATSYP124, SYP124 Qa-type SYP1-group component of SNARE membrane fusion... 0.05 OrthoFinder output from all 47 species
Dcu_g44323 SYP125, ATSYP125 Qa-type SYP1-group component of SNARE membrane fusion... 0.05 OrthoFinder output from all 47 species
Dde_g43398 ATSYP131, SYP131 Qa-type SYP1-group component of SNARE membrane fusion... 0.02 OrthoFinder output from all 47 species
LOC_Os02g11890.1 ATSYP124,... SYP1-group Qa-type SNARE component 0.03 OrthoFinder output from all 47 species
LOC_Os03g57310.1 SYP121,... SYP1-group Qa-type SNARE component 0.03 OrthoFinder output from all 47 species
LOC_Os06g39050.1 ATSYP124,... SYP1-group Qa-type SNARE component 0.05 OrthoFinder output from all 47 species
Msp_g11528 ATSYP124, SYP124 Qa-type SYP1-group component of SNARE membrane fusion... 0.03 OrthoFinder output from all 47 species
Ore_g26913 SYP123, ATSYP123 Qa-type SYP1-group component of SNARE membrane fusion... 0.03 OrthoFinder output from all 47 species
Ppi_g63426 SYP132, ATSYP132 Qa-type SYP1-group component of SNARE membrane fusion... 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0167.g024205 ATSYP124, SYP124 Qa-type SYP1-group component of SNARE membrane fusion... 0.02 OrthoFinder output from all 47 species
Smo130326 ATSYP124, SYP124 Vesicle trafficking.SNARE target membrane recognition... 0.02 OrthoFinder output from all 47 species
Smo74098 ATSYP124, SYP124 Vesicle trafficking.SNARE target membrane recognition... 0.03 OrthoFinder output from all 47 species
Solyc10g008570.3.1 Solyc10g008570 SYP1-group Qa-type SNARE component 0.04 OrthoFinder output from all 47 species
Solyc12g005580.2.1 ATSYP124,... SYP1-group Qa-type SNARE component 0.04 OrthoFinder output from all 47 species
Zm00001e030621_P001 ATSYP124,... SYP1-group Qa-type SNARE component 0.03 OrthoFinder output from all 47 species
Zm00001e037387_P002 ATSYP124,... SYP1-group Qa-type SNARE component 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
CC GO:0016020 membrane IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR006011 Syntaxin_N 33 238
IPR000727 T_SNARE_dom 240 291
No external refs found!