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  5. GSVIVT01006487001

GSVIVT01006487001 (TPS04, TPS4, GES)


Aliases : TPS04, TPS4, GES

Description : S-linalool synthase OS=Clarkia breweri


Gene families : OG0006488 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0006488_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01006487001
Cluster HCCA: Cluster_89

Target Alias Description ECC score Gene Family Method Actions
Gb_17941 CPS, ATCPS1,... Alpha-bisabolene synthase OS=Abies grandis... 0.03 OrthoFinder output from all 47 species
MA_10431370g0010 No alias Bifunctional isopimaradiene synthase, chloroplastic... 0.03 OrthoFinder output from all 47 species
MA_129574g0010 KS, KS1, ATKS1, ATKS, GA2 Bifunctional levopimaradiene synthase, chloroplastic... 0.02 OrthoFinder output from all 47 species
MA_152325g0010 KS, KS1, ATKS1, ATKS, GA2 Alpha-bisabolene synthase OS=Abies grandis... 0.02 OrthoFinder output from all 47 species
MA_176370g0020 No alias Bifunctional isopimaradiene synthase, chloroplastic... 0.04 OrthoFinder output from all 47 species
Solyc03g006545.1.1 KS, KS1, ATKS1,... Ent-kaur-16-ene synthase, chloroplastic OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
Solyc08g005635.1.1 KS, KS1, ATKS1,... Beta-phellandrene synthase... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000287 magnesium ion binding IEP HCCA
MF GO:0003860 3-hydroxyisobutyryl-CoA hydrolase activity IEP HCCA
MF GO:0004672 protein kinase activity IEP HCCA
BP GO:0006468 protein phosphorylation IEP HCCA
BP GO:0006835 dicarboxylic acid transport IEP HCCA
MF GO:0010333 terpene synthase activity IEP HCCA
BP GO:0015711 organic anion transport IEP HCCA
BP GO:0015740 C4-dicarboxylate transport IEP HCCA
BP GO:0015743 malate transport IEP HCCA
BP GO:0015849 organic acid transport IEP HCCA
MF GO:0016289 CoA hydrolase activity IEP HCCA
MF GO:0016301 kinase activity IEP HCCA
BP GO:0016310 phosphorylation IEP HCCA
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP HCCA
MF GO:0016790 thiolester hydrolase activity IEP HCCA
MF GO:0016835 carbon-oxygen lyase activity IEP HCCA
MF GO:0016838 carbon-oxygen lyase activity, acting on phosphates IEP HCCA
BP GO:0046942 carboxylic acid transport IEP HCCA

No InterPro domains available for this sequence

No external refs found!