Description : Pentatricopeptide repeat-containing protein At3g07290, mitochondrial OS=Arabidopsis thaliana
Gene families : OG0037959 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | HRR: GSVIVT01005921001 | |
Cluster | HCCA: Cluster_12 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
AT3G07290 | No alias | Pentatricopeptide repeat (PPR) superfamily protein | 0.04 | OrthoFinder output from all 47 species |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
No GO annotation available for this sequence |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
BP | GO:0006396 | RNA processing | IEP | HCCA |
MF | GO:0008270 | zinc ion binding | IEP | HCCA |
MF | GO:0016779 | nucleotidyltransferase activity | IEP | HCCA |
MF | GO:0043169 | cation binding | IEP | HCCA |
MF | GO:0046872 | metal ion binding | IEP | HCCA |
MF | GO:0046914 | transition metal ion binding | IEP | HCCA |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR002885 | Pentatricopeptide_repeat | 232 | 257 |
IPR002885 | Pentatricopeptide_repeat | 197 | 225 |
IPR002885 | Pentatricopeptide_repeat | 161 | 190 |
IPR002885 | Pentatricopeptide_repeat | 743 | 771 |
IPR002885 | Pentatricopeptide_repeat | 260 | 292 |
IPR002885 | Pentatricopeptide_repeat | 331 | 361 |
IPR002885 | Pentatricopeptide_repeat | 294 | 326 |
IPR002885 | Pentatricopeptide_repeat | 368 | 417 |
IPR002885 | Pentatricopeptide_repeat | 578 | 627 |
IPR002885 | Pentatricopeptide_repeat | 648 | 695 |
IPR002885 | Pentatricopeptide_repeat | 438 | 487 |
IPR002885 | Pentatricopeptide_repeat | 509 | 556 |
No external refs found! |