GSVIVT01005921001


Description : Pentatricopeptide repeat-containing protein At3g07290, mitochondrial OS=Arabidopsis thaliana


Gene families : OG0037959 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01005921001
Cluster HCCA: Cluster_12

Target Alias Description ECC score Gene Family Method Actions
AT3G07290 No alias Pentatricopeptide repeat (PPR) superfamily protein 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
BP GO:0006396 RNA processing IEP HCCA
MF GO:0008270 zinc ion binding IEP HCCA
MF GO:0016779 nucleotidyltransferase activity IEP HCCA
MF GO:0043169 cation binding IEP HCCA
MF GO:0046872 metal ion binding IEP HCCA
MF GO:0046914 transition metal ion binding IEP HCCA
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 232 257
IPR002885 Pentatricopeptide_repeat 197 225
IPR002885 Pentatricopeptide_repeat 161 190
IPR002885 Pentatricopeptide_repeat 743 771
IPR002885 Pentatricopeptide_repeat 260 292
IPR002885 Pentatricopeptide_repeat 331 361
IPR002885 Pentatricopeptide_repeat 294 326
IPR002885 Pentatricopeptide_repeat 368 417
IPR002885 Pentatricopeptide_repeat 578 627
IPR002885 Pentatricopeptide_repeat 648 695
IPR002885 Pentatricopeptide_repeat 438 487
IPR002885 Pentatricopeptide_repeat 509 556
No external refs found!